| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00682 |
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| Symbol | rfaD |
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| ID | 5555008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 666396 |
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| End bp | 667337 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640906177 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_001443911 |
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| Protein GI | 156973004 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG TAACTGGTGG TGCTGGCATG ATCGGCAGCA ACATTGTTAA AGCTCTGAAC
GAAGCAGGTA TTAACGATAT TCTGGTTGTC GACAACCTAA AAAATGGCAA GAAGTTTAAA
AACTTAGTTG ATCTTGATAT CACTGATTAC ATGGATCGTG ACGACTTCCT TACCCAAATC
ATGGCAGGTG ACGACTTCGG TCCTATCGAA GCTATCTTCC ATGAGGGTGC TTGTTCTGCG
ACAACCGAGT GGGACGGCAA ATACATGATG CTAAACAACT ATGAGTACTC AAAAGAGTTA
CTTCATTACT GTCTAGATCG TGAAATTCCA TTCCTATACG CGTCATCAGC TGCGACATAC
GGTGAGACAG AAACGTTCGT TGAAGAGCGT GAATACGAAG GGGCACTTAA CGTATACGGC
TACTCAAAAC AGCAGTTTGA TAACTACGTT CGTCGCCTAT GGAAAGATGC AGAGGAACAT
GGCGAGCAGC TTTCTCAAAT CACTGGTTTC CGTTACTTCA ATGTATATGG CCCACGGGAA
GATCACAAAG GCAGCATGGC GTCAGTAGCC TTCCACTTAA ATAACCAGAT CAATGCTGGT
GAAAACCCTA AGTTATTTGC GGGCAGCGAA TCATTCAAAC GCGACTTCGT TTACGTCGGT
GATGTGTGCA AAGTAAACCT TTGGTTCCTA GAAAATGGTG TTTCTGGCAT CTTCAACTGC
GGTACTGGTC GTGCAGAATC TTTTGAAGAA GTGGCAAAAG CAGTAGTCAA ACACCACAAC
AAAGGTGAAA TCCAAACCAT TCCGTTCCCT GATCACCTAA AAGGCGCTTA CCAAGAATTC
ACTCAAGCGG ACCTAACTAA GCTTCGTGCA GCTGGTTGTG ATGTAGAATT CAAAACGGTG
GCTGAGGGTG TTGCTGAATA CCTAGCGATT CAAAACCGTT AA
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| Protein sequence | MIIVTGGAGM IGSNIVKALN EAGINDILVV DNLKNGKKFK NLVDLDITDY MDRDDFLTQI
MAGDDFGPIE AIFHEGACSA TTEWDGKYMM LNNYEYSKEL LHYCLDREIP FLYASSAATY
GETETFVEER EYEGALNVYG YSKQQFDNYV RRLWKDAEEH GEQLSQITGF RYFNVYGPRE
DHKGSMASVA FHLNNQINAG ENPKLFAGSE SFKRDFVYVG DVCKVNLWFL ENGVSGIFNC
GTGRAESFEE VAKAVVKHHN KGEIQTIPFP DHLKGAYQEF TQADLTKLRA AGCDVEFKTV
AEGVAEYLAI QNR
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