| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00641 |
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| Symbol | |
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| ID | 5556102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 630306 |
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| End bp | 632135 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640906136 |
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| Product | ABC oligopeptide transporter periplasmic component |
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| Protein accession | YP_001443870 |
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| Protein GI | 156972963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TATTTTTAGC GTCCACGCTG AGCGCCCTAA GTTTTGGTGC GATGTCAGCA
ACGCTTCCGA CTGACTTAAA CTGGCAAACA AACTGGGATG AGCCACAATA TGGCTCTCCT
GAAGCAAAAC GCGGTGGTAC TTTCCGAGCG TATATGTCGA GCTTTCCGCA GACTTTACGC
AGCGTTGGCC CTGATGCGAA CTCAGGTTTG CGTTCTTATA TCTTGGATGA AACACCGGGC
TTGGTGGTAC GTCACCCAGA TACTCTAGAA TTCATCCCAG AGTTAGCCAA TGAGTGGGCA
CTAGCTGGTG ATAATAAGAC GGTTTACTTC AAACTAAACC CAGAAGCGAA ATGGTCCGAT
GGCAAACCAG TCACGGCAGA CGATTTTGTT TTCATGCTTA AGTTCTATCG TTCGAAAGAC
ATTCTCGAGC CTTGGTACAA CGATTACTAC AACAAAACTG TCGCTGATGT GATTAAGTTT
GATGATCATA CGTTCGCCGT GAAGGCAGCG AAAGAACTTA ATCCCGAAGA GTTGTTGTTA
AGAATGGGGG CGCTGCGTCC TCGTCCTGCT CACTTCTATG CGAATCCAAA GAAAGATGAG
AACGGTGATG GTATTCACGA CAACTTTGTC CGCTATTACA ACTTTAAGAG CGAGCCTACG
ACCAGTGCTT ACTACCTAGA CGATATCAAA AAAGGTAAAA GCGTAACCTT TAAGCACGTC
GGTGAGGACT GGTGGGGTTA TACCAATAAG TACTACGAGA ACCGCTATAA CGTAGACAAG
ATTCGCATCA CGGTTATTCG TGATAACGAT ATCGCCAAGA AGCACTTCGA GAAAGGCAGT
TTAGATGCGT TTGGCCTTGT GCTACCGAGT TTATGGCATG ATAAGTCCAA TACCGCACCT
TATCAAAAAG GCTACATCCA GAAGTTTTGG GGTTACAACC AATACCCTGT TGGCGCTGGC
GGCGTTTGGA TGAACACTGC AATGCCACTA TTGGATGATT TAAACATCCG TAAGGGTATT
ACATACGCGA TCGATTTTGA TGGCATGATC GAAAACATCA TGCGTGGTGA TTACAGCCGT
AAACCTAACC CAACAGGCTA CGGGTATGGT AAGTACACCC TGCCAGACGC GAAAGCACCA
AAGTTTGATC CAGAAAAAGC GGTGGAGGCG TTTGCTGCAG CTGGTTTCGA TAAGATTGGC
TCCGATGGTA TCCGTGTCAA TGACAAAGGG CAACGCTTGA GCTTCGAGTT GACCTATGCA
TCGCCAGTGC AAACACCTCG TATCGCATTT GTGCGTGAGC AAGCGAAGTT GGCTGGTTTG
GATATTGAAC TTAAATTGAT CGATGGCTCA TCGATGTTCA AATACGTACG CGAGAAAAAG
CACGATTTAG CGTTTTTCGA TATGGGTACG TCGTCTGAGA TCCCAACATA CTGGGAGTAC
TTTCACTCAG TGAATGCCAA CAAGCCACAA ACTAACTCGT TCACAAACTA CAGCACACCA
GAGCTTGATG AGAAAATCAT CGAGTACCGT TTCAATATGG ACATGGATAA GAAGATCCAA
TTGGGTCATG AAATCCAGCG CGACATCATT GACGCGCACG TGATTGTTCC GGGTTATATG
GTGCCATACG TTCGTTACGG CCATTGGAGC TGGTTGAAAC TGCCTGAGAA GCCAATGAAC
CGAATGACAG AAGCCTTGTT CAGTGGTCGC ATTATTGGCG ATGGTACTTA CTGGATTGAT
AAGGACGCTA AGAAACAAAC CCAAAAGGCG ATGAAGTCGG GTAAAACCTT TGAACCGGTT
GTTGTCGTTG ATGACACGTA TAAGCTGTAA
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| Protein sequence | MKKLFLASTL SALSFGAMSA TLPTDLNWQT NWDEPQYGSP EAKRGGTFRA YMSSFPQTLR
SVGPDANSGL RSYILDETPG LVVRHPDTLE FIPELANEWA LAGDNKTVYF KLNPEAKWSD
GKPVTADDFV FMLKFYRSKD ILEPWYNDYY NKTVADVIKF DDHTFAVKAA KELNPEELLL
RMGALRPRPA HFYANPKKDE NGDGIHDNFV RYYNFKSEPT TSAYYLDDIK KGKSVTFKHV
GEDWWGYTNK YYENRYNVDK IRITVIRDND IAKKHFEKGS LDAFGLVLPS LWHDKSNTAP
YQKGYIQKFW GYNQYPVGAG GVWMNTAMPL LDDLNIRKGI TYAIDFDGMI ENIMRGDYSR
KPNPTGYGYG KYTLPDAKAP KFDPEKAVEA FAAAGFDKIG SDGIRVNDKG QRLSFELTYA
SPVQTPRIAF VREQAKLAGL DIELKLIDGS SMFKYVREKK HDLAFFDMGT SSEIPTYWEY
FHSVNANKPQ TNSFTNYSTP ELDEKIIEYR FNMDMDKKIQ LGHEIQRDII DAHVIVPGYM
VPYVRYGHWS WLKLPEKPMN RMTEALFSGR IIGDGTYWID KDAKKQTQKA MKSGKTFEPV
VVVDDTYKL
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