| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00602 |
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| Symbol | |
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| ID | 5554586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 588428 |
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| End bp | 589933 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906097 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001443831 |
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| Protein GI | 156972924 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTG ATATGTTAGA CACAGCGCCA AGCATGCGCC GTCTGCCATT CAGTTTTGCC
AACCGCTTTA AACTGGTATT GGAGACGGAG CACCCTGAGC GCCCTCCAAT CTTGTATTAC
GTCGAGCCGC TCAATCCTGC GGCTTTGGTT GAAGTACGCC GTGTACTGAA ACAAAACTTT
ATTCCTCAAC CGATGGACAA AGAAGCGTTC GATAAAAAGC TAACTGAAGC TTATCAGCGC
GACTCTTCTG AAGCTCGTCA GTTGATGGAA GACATTGGTG CAGACAGTGA CGACTTTTTC
TCATTGGCAG AAGAGCTGCC GCATGATGAG GACTTGCTAG AGTCTGAAGA TGATGCGCCA
ATCATCAAAT TGATCAATGC CATGCTCGGT GAAGCGATCA AAGAAGGGGC ATCGGATATT
CATATCGAAA CGTTCGAGAA AACCCTGTCA ATTCGTTTTC GTGTCGATGG TGTATTGCGT
GAAGTCTTAA CCCCAAGCCG TAAACTCGCC CCTTTGCTGG TTTCTCGTGT GAAGGTAATG
GCAAAACTAG ATATCGCAGA AAAACGTGTT CCTCAAGATG GCCGTATTTC TCTGCGTATC
GGTGGTCGAG CAGTAGACGT TCGTGTTTCT ACCATGCCTT CATCGCATGG TGAGCGTGTG
GTAATGCGTC TATTGGACAA AAACGCAACG CGTCTAGATT TACACAGTTT GGGTATGACG
CCATCGGTGC ACGATAACTT TGGTCGCTTG ATTCAACGTC CACACGGTAT CATCTTGGTG
ACTGGTCCGA CAGGTTCGGG TAAGTCAACG ACCTTGTACG CGGGCTTGCA AGAGATCAAC
AGCAACGAAC GTAATATTCT GACGGTAGAA GACCCAATCG AATTCGATAT CGATGGTATC
GGCCAAACAC AGGTAAACCC TAAGGTTGAT ATGACCTTTG CGCGAGGTCT GCGTGCGATT
CTTCGTCAAG ACCCGGATGT AGTGATGGTC GGTGAGATCC GTGACTTAGA GACAGCACAG
ATTGCGGTGC AAGCCTCTTT GACTGGTCAC TTGGTTATGT CGACACTACA CACCAACACG
GCTGTGGGTG CGATTACTCG TCTGCGTGAC ATGGGTATTG AACCCTTCCT GATCTCTTCT
TCGCTATTGG GCGTGTTAGC ACAGCGCCTA GTTCGAACCC TTTGTTCTGA CTGTAAAGAG
CCATACGAAG CGGATAAAGA ACAGAAGAAA TTGTTCGGTC TGGAAGAGCA CGAATCGCTG
GTTCTGCATC GAGCAAAAGG GTGTGAAGTA TGTAACCAAA AAGGTTACCG CGGTCGTACT
GGTATTCACG AACTTCTAAT GGTGGATGAG AAAGTTCAAG AACTGATTCA CAGCGAAGCG
GGTGAGCAAG AAATTGAGAA AACCGTACGC CAGCATACGC CAAGTATTCG TAGCGACGGC
CTGAGTAAAG TCAGCCGTGG TATCACTTCT CTTGAAGAAG TCATGCGAGT GACCAAGGAA
GCTTAA
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| Protein sequence | MMVDMLDTAP SMRRLPFSFA NRFKLVLETE HPERPPILYY VEPLNPAALV EVRRVLKQNF
IPQPMDKEAF DKKLTEAYQR DSSEARQLME DIGADSDDFF SLAEELPHDE DLLESEDDAP
IIKLINAMLG EAIKEGASDI HIETFEKTLS IRFRVDGVLR EVLTPSRKLA PLLVSRVKVM
AKLDIAEKRV PQDGRISLRI GGRAVDVRVS TMPSSHGERV VMRLLDKNAT RLDLHSLGMT
PSVHDNFGRL IQRPHGIILV TGPTGSGKST TLYAGLQEIN SNERNILTVE DPIEFDIDGI
GQTQVNPKVD MTFARGLRAI LRQDPDVVMV GEIRDLETAQ IAVQASLTGH LVMSTLHTNT
AVGAITRLRD MGIEPFLISS SLLGVLAQRL VRTLCSDCKE PYEADKEQKK LFGLEEHESL
VLHRAKGCEV CNQKGYRGRT GIHELLMVDE KVQELIHSEA GEQEIEKTVR QHTPSIRSDG
LSKVSRGITS LEEVMRVTKE A
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