Gene VIBHAR_00590 details

Gene Information

• Locus tag: VIBHAR_00590
• ID: 5554443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 573976
• End bp: 575805
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640906085
• Product: GTPase
• Protein accession: YP_001443819
• Protein GI: 156972912
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACTC CACAGATTGA TAAATTAAGA AATATCGCGA TTATCGCGCA CGTTGACCAC 
GGTAAAACAA CGTTGGTTGA CAAGCTGCTA CAACAATCAG GCACGCTAGA GTCTCGCGGT 
GAAGCTGAAG AGCGAGTCAT GGACTCGAAC GACATTGAGA AAGAGCGTGG CATCACCATT 
CTTGCTAAAA ACACAGCAAT TAACTGGAAT GACTACCGCA TCAACATCGT AGATACTCCG 
GGACACGCGG ACTTCGGTGG TGAAGTAGAA CGTATCATGT CGATGGTAGA TTCAGTACTA 
CTTATCGTTG ACGCAGTTGA TGGCCCAATG CCACAAACGC GTTTCGTAAC GCAAAAAGCA 
TTTGCTCACG GCCTTAAGCC AATCGTTGTA ATCAACAAGA TTGACCGCCC TGGTGCACGT 
CCTGATTGGG TTATGGATCA AGTATTCGAC CTATTCGACA ACCTAGGTGC AACTGACGAA 
CAGCTAGACT TTAAAGTTGT TTACGCGTCA GCACTTAACG GTTGGGCTGC GCTAGAAGAA 
GGCGAAACTG GCGAGAACAT GGAACCACTG TTCCAAACTA TCGTTGAAGA AGTAACTGCA 
CCTCAAGTTG ACCTAGACGG TCCTCTACAG ATGCAAGTTT CTCAGCTAGA TTACAGCTCT 
TACGTTGGTG TTATCGGTGT TGCTCGTGTA ACTCGTGGTA GCGTTAAGCC AAACCAACAA 
GTAACGGTTA TCGGTGCTGA CGGTAAGACT CGCAACGGTA AAGTAGGTAC AGTAATGGGC 
TACCTAGGCC TAGAGCGTCA CGAAGTTGAG CAAGCGAATG CGGGTGATAT CATTGCAATC 
ACTGGTCTTG GCGAGCTAAA AATCTCTGAC ACTATCTGTG CACAAAACCA AGTTGAAGCA 
CTACCACCGC TATCTGTTGA TGAACCAACA GTAACGATGA CGTTCCAAGT AAACACGTCT 
CCATTCGCTG GTAAAGAAGG TAAGTTCGTA ACTTCACGTA ACATCCTTGA GCGTCTAGAG 
AAGGAACTGG TACACAACGT TGCACTACGT GTTGAGCAAA CAGACGATCC AGACAAATTC 
CGCGTATCAG GCCGTGGTGA GCTTCATCTA TCTATCCTGA TCGAAAACAT GCGTCGTGAA 
GGCTTCGAGC TTGCTGTATC TCGTCCAGAA GTAATCATCA AAGAAGAAGA TGGTCAGCTA 
ATGGAACCGT TCGAGACTGT AACGATCGAC GTTATGGAAG AGCACCAAGG CGGCATCATG 
GAGAACATCG GCCTACGTAA AGGTGAGCTG AAAGACATGT CTCCAGATGG TAAAGGCCGT 
GTACGTATGG ACTTCGAAAT GCCATCACGT GGTCTGATCG GTTTCCAAAC TGAGTTCATG 
ACACTGACTT CAGGTTCTGG TCTTCTATAC CATACATTTG ACCACTACGG CCCACACAAA 
GGCGGTAACA TCGGTCAACG TGTTAACGGT GTACTAATTG CTAACGCAAT GGGTAAAGCG 
CTAACTAACG CACTATTCAA CCTTCAAGAA CGTGGTCGTC TATTCATCGG TCACGGTGTT 
GAAGTTTACG AAGGCATGGT TATCGGTATC CACAGCCGCG ACAACGACCT AACAGTAAAC 
GCACTGAAAG GTAAGCAGCT GACTAACGTT CGTGCATCAG GTACAGATGA CGCACAGGTT 
CTTACTCCGC CAATCAAGAT GACTCTTGAG CAAGCGCTAG AGTTCATCGA TGATGACGAA 
CTAGTAGAAG TAACACCTGA AAGCATCCGT ATCCGTAAGA AATTCCTAAC GGAAAGCGAT 
CGTAAACGTG CTTCACGTTC AGCAAAATAA 

 

Protein sequence

MATPQIDKLR NIAIIAHVDH GKTTLVDKLL QQSGTLESRG EAEERVMDSN DIEKERGITI 
LAKNTAINWN DYRINIVDTP GHADFGGEVE RIMSMVDSVL LIVDAVDGPM PQTRFVTQKA 
FAHGLKPIVV INKIDRPGAR PDWVMDQVFD LFDNLGATDE QLDFKVVYAS ALNGWAALEE 
GETGENMEPL FQTIVEEVTA PQVDLDGPLQ MQVSQLDYSS YVGVIGVARV TRGSVKPNQQ 
VTVIGADGKT RNGKVGTVMG YLGLERHEVE QANAGDIIAI TGLGELKISD TICAQNQVEA 
LPPLSVDEPT VTMTFQVNTS PFAGKEGKFV TSRNILERLE KELVHNVALR VEQTDDPDKF 
RVSGRGELHL SILIENMRRE GFELAVSRPE VIIKEEDGQL MEPFETVTID VMEEHQGGIM 
ENIGLRKGEL KDMSPDGKGR VRMDFEMPSR GLIGFQTEFM TLTSGSGLLY HTFDHYGPHK 
GGNIGQRVNG VLIANAMGKA LTNALFNLQE RGRLFIGHGV EVYEGMVIGI HSRDNDLTVN 
ALKGKQLTNV RASGTDDAQV LTPPIKMTLE QALEFIDDDE LVEVTPESIR IRKKFLTESD 
RKRASRSAK