Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00572 |
Symbol | |
ID | 5554723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 554377 |
End bp | 557169 |
Gene Length | 2793 bp |
Protein Length | 930 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906067 |
Product | DNA polymerase I |
Protein accession | YP_001443802 |
Protein GI | 156972895 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTA TTCCTGAAAA TCCGTTGATT CTGATCGACG GCTCTTCTTA TCTATATCGC GCTTTTCACG CTTACCCAGG CACGATGAGT AACGGTGAAA TTCCAACTAA CGCAGTTTAC GGTGTAGTAA ACATGTTACG CAGCATGATG CGTCAGTTTG CTTCTGATCG TATCGCAGTA GTTTTCGATG CGAAGGGTAA AACCTTCCGT GACGATATGT ACCCGGAATA CAAAGCGAAT CGTCCACCAA TGCCGGATGA TCTTCGTTGC CAGATTGAAC CTCTGCATAA CGTTATTCGT GCTATGGGCC TGCCATTGAT CTGTATTCCA GGTGTAGAAG CCGATGACGT GATTGGTACT CTGGCTTATC AAGCATCGCA GCAAGGCATG CCTGTTTTGA TCAGTACTGG CGATAAAGAT ATGGCGCAGC TGGTGGATGA CAACGTTACC TTGATCAACA CCATGACCAA CGTCGTGATG GATCGTGAAG GTGTGGTTGA GAAGTTTGGT ATCCCACCAG AATTGATCAT CGACTACCTA GCGTTGATGG GCGATAAAGT CGATAACATT CCTGGTGTTC CGGGCGTGGG TGATAAAACC GCAACTGCTC TGCTACAAGG TATTGGCGGT CTGACAAAGC TGTATGAAAA CCTCGATGAT ATTGCAGCGC TTGGCTTCCG TGGTTCAAAA ACCATGGCGA AGAAGCTAGT CGATAACAAA GACAACGCAA TGCTGTCTTA CGAGCTTGCG ACCATCAAGC TGGATGTGGA ACTGGAAGAG ACGCCAGAAT CATTGCTAAA AGCAGAACCA AGCACCGATG AGCTGATCAA ACTGTACGGT CAGTTGACGT TCAAGTCTTG GTTGAACGAG CTATTAGAAG GCGGTACAGG CGTGGTTGAA GCGGATGAAT CAACTGGCGC AGCGCGTGGT GGTTCTGCTG CATCTAAAGC TGATATGGAT ACTTCAGCGG TAAAAATAGA CCGTAGCCAA TACGAAACCA TCCTAGATGA AGCTTCATTC AATGCTTGGT TAGACAAACT AAAAGCATCG GAGTTATTCG CGTTTGATAC CGAAACTGAC AGCCTAGATT ACATGGTGGC AAACTTGGTT GGTTTGTCAT TTGCAACTGA CGAAGGCATT GCTGCTTATG TACCAGTGGC CCACGACTAC CTAGATGCGC CGCAGCAGCT GGATCGTGAT TGGGTACTGG CACAGCTAAA GCCGATTCTT GAAGATGAGG CTCAGGCGAA AGTTGGTCAA AACCTAAAAT ACGATGCATC TGTGCTGGCT CGCTACGGCA TCGAGATGAA AGGCATCAAG CATGACACCA TGTTGGCGTC TTACGTCTAC AACAGTGTAG GCGGCAAGCA TGATATGGAT AGCTTGGCAC TGCGCTTCCT ACAGCACAGC TGCATTTCAT TCGAGCAAAT CGCAGGTAAA GGTAAAAACC AACTGACCTT CAACCAAATC GATCTGGATG AAGCTTCACC ATATGCTGCA GAAGATGCAG ACGTGACACT TCGTCTGCAT AACCGTTTGT TTGCTAACAT CGAACAAGAT GAAAAGCTAA AAACTGTATA CGAAGAAATC GAAATGCCAC TTGTGCCCGT GCTGTCTCGC ATTGAGCGTA CTGGTGTATT GATTGATGAC ATGAAGCTTA GCGCGCAATC TGTAGAAATT GCTGCACGTC TGGACGAGCT TGAGCAAAAG GCGTACGAGA TTGCAGAACA AGAGTTCAAC ATGAATTCTC CGAAGCAACT GCAAGCGCTT CTGTTTGAGA AAATGGGTCT ACCAGTTATC AATAAGACGC CATCTGGCAC GCCTTCTACT AATGAAGAAG TGCTGCAAGA GCTGGCTCTG GATTACCCAC TACCAAAACT GATTTTGGAA TACCGTGGTC TGGCGAAGCT AAAATCAACC TACACCGACA AACTCCCGAA GATGATCAAC CCATCAACGG GTCGTGTGCA TACTTCTTAC CACCAAGCGG TGACCGCAAC GGGTCGTCTA TCATCCACCG ATCCTAACTT GCAGAACATC CCAATTCGTA ATGAAGAAGG TCGTCGTATT CGTCAGGCAT TCGTTGCCCC TACGGGTTAC AAGATTCTGG CAGTCGACTA CTCTCAAATC GAATTGCGTA TTATGGCGCA CCTATCAGGT GACCAAGCAC TGCTTGATGC GTTCCGTGAC GGTAAAGATA TCCACGCGGC AACCGCAGCA GAAATCATGG GCGTTTCTAT TGAAGACGTT TCAAGTGAGC AACGTCGCCG TGCGAAAGCG GTTAACTTCG GTCTTATCTA CGGCATGAGT GCGTTTGGTT TGGCGAAGCA ACTGGGCATT CCTCGTGGTG AGGCACAAGC GTACATGGAC AAGTATTTCG AGCGCTACCC AGGCGTAATG CAGTACATGG AAGACACGCG CAGTGCGGCT TCAGAGCAAG GTTTCGTCGA GACAATCTTT GGTCGTCGCT TGCACCTTCC TGAAATTCAA TCTCGCAACG GCATGCGTCG TAAGGCGGCA GAGCGTGCAG CGATCAACGC GCCGATGCAA GGCACCGCTG CGGACATCAT CAAGAAAGCG ATGCTGTTAG TTGATCAGTG GATTCAAGAA GAAGGCAATG GTCGAGTGAA ACTTCTGATG CAAGTACACG ATGAACTGGT GTTTGAAGTT GAAGAGTCGT CTTTGTCCGA AATTGAAAGT AAAGTACAGA ATTTGATGGA ATCTGCAGCA GAGCTAAAAG TGCCTCTAGT GGCAGAAGCG GGTCACGGTG ACAACTGGGA TCAAGCACAC TAG
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Protein sequence | MASIPENPLI LIDGSSYLYR AFHAYPGTMS NGEIPTNAVY GVVNMLRSMM RQFASDRIAV VFDAKGKTFR DDMYPEYKAN RPPMPDDLRC QIEPLHNVIR AMGLPLICIP GVEADDVIGT LAYQASQQGM PVLISTGDKD MAQLVDDNVT LINTMTNVVM DREGVVEKFG IPPELIIDYL ALMGDKVDNI PGVPGVGDKT ATALLQGIGG LTKLYENLDD IAALGFRGSK TMAKKLVDNK DNAMLSYELA TIKLDVELEE TPESLLKAEP STDELIKLYG QLTFKSWLNE LLEGGTGVVE ADESTGAARG GSAASKADMD TSAVKIDRSQ YETILDEASF NAWLDKLKAS ELFAFDTETD SLDYMVANLV GLSFATDEGI AAYVPVAHDY LDAPQQLDRD WVLAQLKPIL EDEAQAKVGQ NLKYDASVLA RYGIEMKGIK HDTMLASYVY NSVGGKHDMD SLALRFLQHS CISFEQIAGK GKNQLTFNQI DLDEASPYAA EDADVTLRLH NRLFANIEQD EKLKTVYEEI EMPLVPVLSR IERTGVLIDD MKLSAQSVEI AARLDELEQK AYEIAEQEFN MNSPKQLQAL LFEKMGLPVI NKTPSGTPST NEEVLQELAL DYPLPKLILE YRGLAKLKST YTDKLPKMIN PSTGRVHTSY HQAVTATGRL SSTDPNLQNI PIRNEEGRRI RQAFVAPTGY KILAVDYSQI ELRIMAHLSG DQALLDAFRD GKDIHAATAA EIMGVSIEDV SSEQRRRAKA VNFGLIYGMS AFGLAKQLGI PRGEAQAYMD KYFERYPGVM QYMEDTRSAA SEQGFVETIF GRRLHLPEIQ SRNGMRRKAA ERAAINAPMQ GTAADIIKKA MLLVDQWIQE EGNGRVKLLM QVHDELVFEV EESSLSEIES KVQNLMESAA ELKVPLVAEA GHGDNWDQAH
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