| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00480 |
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| Symbol | |
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| ID | 5552807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 460150 |
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| End bp | 463272 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640905975 |
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| Product | multidrug efflux pump |
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| Protein accession | YP_001443715 |
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| Protein GI | 156972808 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTA CTGATGTTTT TATTAAACGT CCAGTTTTAG CGGTATCGAT CAGCTTTTTG
ATTGCGTTGC TTGGTTTGCA AGCCGTATTC AAGATGCAAG TTCGTGAATA CCCTGAAATG
ACAAACACGG TGGTTACCGT AACCACCAGT TATTACGGTG CGAGTGCCGA CCTGATCCAA
GGCTTTATTA CCCAGCCTTT GGAGCAAGCC GTCGCTCAGG CCGATAACAT CGACTATATG
ACTTCATCCT CGGTGCTTGG TACATCTACC ATCACTGTAA ACATGAAGCT GAACACTGAC
CCAAATGCAG CGCTGTCTGA TATCTTGGCG AAAACCAACT CGGTTCGTTC ACAGCTTCCA
AAAGAAGCGG AAGACCCAAC AGTAACCATG TCGACTGGCT CGACTACCGC AGTACTGTAC
ATCGGTTTCA CCAGTGACGA GTTGTCTTCT AGCCAGATCA CTGACTACCT TGAGCGTGTA
ATTAACCCTC AGCTATTTAC GGTAAACGGT GTATCGAAGG TGGACTTATA CGGTGGTATG
AAATACGCGC TCCGCGTATG GCTAGATCCA GCGAAAATGG GCGCACTTAA GCTGACAGCA
ACCGACGTGA TGACGGTACT AAACGCCAAC AACTATCAGT CGGCAACTGG CCAGGCGACA
GGTGAATTCG TACTTTACAA CGGTAGCGCA GATACTCAGG TATCCAACGT TGCTGAACTC
GAGGCACTAG TTGTTAAAAC AGGTGAAGGT GACGTAATTC GTCTTGGCGA CATTGCAAAG
GTCACATTAG AAAAGAGCCA CGACATTTAC CGTGCAAATG CGAACGGTCA GGAGGCAGTA
GTTGCTGCTA TCAACGCGGC ACCAAGCGCT AACCCAATCA ACATTTCGGC AGATGTACTG
AAGCTTTTGC CTCAATTAGA GCGTAACTTG CCAAGTAACA TCAAAATGAA CGTGATGTAC
GACTCAACGA TCGCCATCAA TGAATCTATT CACGAAGTTG TGAAAACCAT TCTTGAGGCG
GCAGTGATCG TACTTGTTGT GATCACTTTG TTCCTTGGTT CATTCCGTGC GGTAATTATC
CCTATCGTTA CTATCCCGCT TTCATTGATT GGTGTTGCGA TGGTGATGCA GGCAATGGGC
TTCTCATGGA ACTTGATGAC ACTTCTGGCA ATGGTACTCG CCATCGGTCT GGTAGTGGAT
GATGCGATCG TGGTTCTTGA GAACGTTGAC CGCCACATCA AAGAAGGGGA ATCGCCGTTC
CGTGCAGCCA TCATAGGTAC TCGTGAAATC GCCGTACCAG TAATCGCAAT GACGCTAACC
CTAGGTGCAG TGTACGCGCC GATCGCGCTG ATGGGCGGTA TCACGGGCTC TCTATTTAAA
GAGTTCGCAT TAACCCTAGC TGGTGCAGTA TTTGTGTCCG GTATCATCGC GCTAACTCTG
TCACCGATGA TGTGTTCAAA AATGCTTAGG GCAAACGAAG AGCCAAGCAA GTTTGAACAA
AAAGTACACC ACGTATTGGA TGGCATGACC AACCGCTACG CAAAAATGCT GACCGCTGTT
ATGGCACACC GCCCAGTGAT CATTGCTTTC GCTATCATCG TGTTCACAAC GCTACCAATC
CTGTTTAAGT TTATTCCAAG TGAATTGGCT CCTTCAGAGG ACAAAGGCGT AGTGGTACTG
ATGGGAACAG CACCATCGAA TGCAAACTTG GACTACATTG AACATACCAT GAGAGACGTG
AATAAGATTC TGTCTAATCA GCCGGAAGTG GAATATGCTC AAGTGTTTAA TGGTGTACCA
AACTCAAACC AAGCGTTCGG TCTAGCGACT CTAAAACCTT GGAGTGAGCG TGAGGCAAGC
CAGGCAGATA TTACCAAGCG TGTAGGTGAG TTGGTTTCTC ACGTACCGGG CATGTCTGTA
ACCGCATTCC AGATGCCAGA GCTTCCTGGT GCCGGTTCAG GTCTACCGAT TCAGTTCGTT
ATCACTACGC CAAACAGCTT CGAGAGCTTG TTTACTATCG CAAGTGACAT CCTAGCTGAT
GTATCTACTA GCCCACTATT TGTCTACTCA GATCTGGATC TAAACTACGA TTCAGCAACG
ATGAAGATCA GCATCGACAA AGACAAGGCT GGTGCGTACG GCGTGACCAT GCAAGACATT
GGTGTAACAC TAAGTACCAT GATGGCGGAC GGTTACGTGA ACCGAATCGA CCTAAACGGT
CGTTCATACG AGGTTATCCC TCAAGTTGAA CGTAAATGGC GCCTTAACCC AGAGTCGATG
AAGAACTACT ACGTTCGCTC AGTTGACGGT AAAGCAGTTC CACTGGGTAG CTTGATCACG
ATTGATGTTG TCGCAGAGCC TCGCTCACTG CCTCACTTCA ACCAGCTAAA CTCAGCAACC
GTTGGTGCAG TACCTTCACC AGGTGTTGCA ATGGGTGATG CGATCAACTG GTTCGAAGAC
GTGGCACAAA ACAAACTGCC ATCGGGCTAC AACCATGACT ACATGGGTGA AGCTCGTCAG
TTTGTAACGG AAGGTAGCGC ACTATACGCC ACATTCGGCT TGGCTTTGGC GATCATCTTC
CTAGTACTGG CGATTCAGTT TGAATCTATC CGCGATCCAA TCGTAATCAT GGTATCGGTG
CCGCTAGCGG TATGTGGTGC ATTGATTGCT CTGGCGTGGG GTACGGCATC GATGAACATC
TACTCGCAGG TTGGTTTAAT TACTCTGGTT GGTCTGATCA CCAAGCACGG TATCCTGATC
TGTGAAGTAG CGAAAGAAGA GCAGTTACAC AACAAACTGT CTCGTATCGA TGCAGTAATG
GAAGCGGCGA AAGTTCGTCT ACGTCCAATC CTGATGACAA CAGCGGCGAT GATTGCAGGT
CTGATCCCAC TGATGTATGC AACAGGCGCA GGTGCGGCTC AGCGCTTCAG TATCGGTATC
GTAATCGTTG CTGGTCTAGC GATCGGTACA CTGTTTACGC TATTCGTATT GCCTGTGATT
TACAGCTACC TAGCTGAGAA ACACAAGCCA CTACCAGTGT TTGTTGAAGA CAAAGACTTG
GAAAAGCTCG CTCGAGTCGA TGAAGCAAAA GCTGCTCATC GCGAATTAGC TGATAACAAG
TAA
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| Protein sequence | MRFTDVFIKR PVLAVSISFL IALLGLQAVF KMQVREYPEM TNTVVTVTTS YYGASADLIQ
GFITQPLEQA VAQADNIDYM TSSSVLGTST ITVNMKLNTD PNAALSDILA KTNSVRSQLP
KEAEDPTVTM STGSTTAVLY IGFTSDELSS SQITDYLERV INPQLFTVNG VSKVDLYGGM
KYALRVWLDP AKMGALKLTA TDVMTVLNAN NYQSATGQAT GEFVLYNGSA DTQVSNVAEL
EALVVKTGEG DVIRLGDIAK VTLEKSHDIY RANANGQEAV VAAINAAPSA NPINISADVL
KLLPQLERNL PSNIKMNVMY DSTIAINESI HEVVKTILEA AVIVLVVITL FLGSFRAVII
PIVTIPLSLI GVAMVMQAMG FSWNLMTLLA MVLAIGLVVD DAIVVLENVD RHIKEGESPF
RAAIIGTREI AVPVIAMTLT LGAVYAPIAL MGGITGSLFK EFALTLAGAV FVSGIIALTL
SPMMCSKMLR ANEEPSKFEQ KVHHVLDGMT NRYAKMLTAV MAHRPVIIAF AIIVFTTLPI
LFKFIPSELA PSEDKGVVVL MGTAPSNANL DYIEHTMRDV NKILSNQPEV EYAQVFNGVP
NSNQAFGLAT LKPWSEREAS QADITKRVGE LVSHVPGMSV TAFQMPELPG AGSGLPIQFV
ITTPNSFESL FTIASDILAD VSTSPLFVYS DLDLNYDSAT MKISIDKDKA GAYGVTMQDI
GVTLSTMMAD GYVNRIDLNG RSYEVIPQVE RKWRLNPESM KNYYVRSVDG KAVPLGSLIT
IDVVAEPRSL PHFNQLNSAT VGAVPSPGVA MGDAINWFED VAQNKLPSGY NHDYMGEARQ
FVTEGSALYA TFGLALAIIF LVLAIQFESI RDPIVIMVSV PLAVCGALIA LAWGTASMNI
YSQVGLITLV GLITKHGILI CEVAKEEQLH NKLSRIDAVM EAAKVRLRPI LMTTAAMIAG
LIPLMYATGA GAAQRFSIGI VIVAGLAIGT LFTLFVLPVI YSYLAEKHKP LPVFVEDKDL
EKLARVDEAK AAHRELADNK
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