Gene VIBHAR_00459 details

Gene Information

• Locus tag: VIBHAR_00459
• Symbol: fadA
• ID: 5553199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 442859
• End bp: 443983
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640905954
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_001443701
• Protein GI: 156972794
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCGCT CTAAAGGTGG TGCTTTCCGT CATACACGAG CAGAAGATCT ATCTGCGCGC 
CTAATGAAAG GTATTCTTGC GCGTAACCCA CAGGTAAACC CAAGCGAGAT TGAAGATATC 
TACTGGGGCT GTGTACAACA AACCCTAGAA CAAGGCTTTA ACGTTGCACG TAATGCCGCG 
CTGCTTGCTG GCCTACCAAT TGAGATTGGT GCCGTGACGG TTAACCGCTT GTGTGGTTCA 
TCCATGCAAG CACTTCACGA CGGTACACGT GCCATCATGA CGGGTGATGC TGAAATCTGC 
CTAATTGGTG GTGTTGAGCA CATGGGACAC GTACCAATGA ACCATGGCGT GGACTTCCAC 
CCAGGCATGT CAAAGACGGT TGCAAAAGCA GCAGGCATGA TGGGCTTAAC GGCAGAAATG 
CTTGGTAAGC TGCATGGCAT TAGCCGTGAA CAACAAGACG AATTTGCTGC GCGTTCTCAT 
GCTCGTGCGC ATGCTGCAAC CGTAGAGGGT CGTTTCAAAA ACGAAATCCT ACCAATTGAA 
GGTCATGCGG CTGACGGCAC GCTGTTCACT CTAGATTACG ATGAAGTGAT TCGCCCTGAA 
ACATCCGTTG AAGGTCTATC TCAACTTCGT CCTGTTTTCG ACCCAGCAAA CGGCACAGTA 
ACAGCCGGTA CATCATCGGC GCTGTCTGAT GGTGCATCCG CGATGTTGAT CATGAGTGAA 
GAAAAAGCCA ATGAGCTTGG TTTGAAGATA CGCGCACGCA TTAAAGGCAT GGCAATTGCC 
GGCTGTGATC CTTCTATCAT GGGTTACGGC CCTGTACCTG CGACGCAAAA AGCACTCAAA 
CGTGCTGGTC TTTCAATTGA AGACATGGAT GTGGTTGAGC TAAACGAAGC ATTTGCAGCG 
CAATCTCTAC CATGTGCTAA AGACTTGGGT CTGCTTGATG TGATGGATGA GAAGGTCAAC 
CTTAACGGTG GTGCGATTGC ATTGGGTCAC CCGCTTGGTT GTTCTGGCTC ACGTATCTCA 
ACAACGTTAA TTAACCTTAT GGAAGCGAAA GACGCGAAAT ATGGTCTGGC TACCATGTGT 
ATCGGTTTAG GCCAGGGTAT TGCGACCGTA TTTGAACGAC CTTAG 

 

Protein sequence

MGRSKGGAFR HTRAEDLSAR LMKGILARNP QVNPSEIEDI YWGCVQQTLE QGFNVARNAA 
LLAGLPIEIG AVTVNRLCGS SMQALHDGTR AIMTGDAEIC LIGGVEHMGH VPMNHGVDFH 
PGMSKTVAKA AGMMGLTAEM LGKLHGISRE QQDEFAARSH ARAHAATVEG RFKNEILPIE 
GHAADGTLFT LDYDEVIRPE TSVEGLSQLR PVFDPANGTV TAGTSSALSD GASAMLIMSE 
EKANELGLKI RARIKGMAIA GCDPSIMGYG PVPATQKALK RAGLSIEDMD VVELNEAFAA 
QSLPCAKDLG LLDVMDEKVN LNGGAIALGH PLGCSGSRIS TTLINLMEAK DAKYGLATMC 
IGLGQGIATV FERP