Gene VIBHAR_00389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00389 
Symbol 
ID5554151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp371642 
End bp372751 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content48% 
IMG OID640905884 
Productnucleotide-binding protein 
Protein accessionYP_001443631 
Protein GI156972724 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAC AAAATGATAT TGATCTCGCT GCCTGGTTAA AGCTTAGTTG TTTACCGGGC 
ATCGGTGGGG TCAAGCTGAA TAAGCTGCTC AGCAAAGATA CGCCGAGCAA TATTGTCCAA 
TACTCGACAG AGCAGCTTCA GCTTTTGGGC TTAACGGCAA AACAGTTGCA AGCATGGTCG 
CAGGTCGATA AAGAAGTCGA TGCTTGTCTG ACTTGGGTTG CAGCATCTTC TCATCATCAT 
ATTCTTACGT TGGCGGATGC TTTGTATCCG CCACTTCTCA AACAAACCGT CGCACCGCCT 
CCTTTACTCT TTGTAAAAGG AGAGGCGAGC TGTTTGTCTC AACCTCAAAT AGCTATGGTT 
GGCAGCCGTA ATGCCAGTGT GGATGGGTTA CAACATGCAA GAACTTTTGC ATCTGACTTG 
GTGCAACACG ATCTGATCGT TACCAGTGGC TTAGCATTGG GTATTGATGG TCATGCTCAT 
GATGGTGCGC TGTTGGCTGG CGGTAAAACC ATCGCAGTGC TAGGTTCGGG GTTAGAACAA 
GTGTACCCAG CAAGACACCG AGGTTTGGCG CAGCGAGTGG CTGAAAATGG AGCGCTTGTT 
TCTGAGTTTC GCCCAGATGC TAAGCCTCGC GCAGAAAACT TTCCACGGCG TAACCGAATC 
ATCAGTGGTT TGTCACTGGG TGTTTTGGTG GTGGAAGCGG CTGAAAAAAG TGGCTCCTTG 
ATTACGGCGC GTTATGCTTT AGAACAAGGT CGAGAAGTTT TCGCTCTGCC AGCTTCGATT 
AATGCACCCA ACGCCAGTGG CGGTAATCAA TTGATTAAAA ACGGGGCTTG TCTCGTACAA 
AATACCCAAG AGGTGCTGAA TGAAATACAG TCTTTGCTCG ACTGGTCTAT TAATCAGAGC 
TTAGATTTAT TTTCTGCGCC AATTGATGAA GAAGAATTGC CATTTCCTCA GCTGTTAGCT 
AACGTAGGAA ATGAGGCTAC ACCAGTTGAT ATTCTTGCAA GCAGGACCAA TATACCTGTC 
CAAGAAGTCA TGATGCAGCT CTTAGAGCTT GAGCTTTCAG GGCATGTTGT TGCAGTATCC 
GGTGGCTATA TTCGAAAGGG GAGGGGCTAG
 
Protein sequence
MTPQNDIDLA AWLKLSCLPG IGGVKLNKLL SKDTPSNIVQ YSTEQLQLLG LTAKQLQAWS 
QVDKEVDACL TWVAASSHHH ILTLADALYP PLLKQTVAPP PLLFVKGEAS CLSQPQIAMV 
GSRNASVDGL QHARTFASDL VQHDLIVTSG LALGIDGHAH DGALLAGGKT IAVLGSGLEQ 
VYPARHRGLA QRVAENGALV SEFRPDAKPR AENFPRRNRI ISGLSLGVLV VEAAEKSGSL 
ITARYALEQG REVFALPASI NAPNASGGNQ LIKNGACLVQ NTQEVLNEIQ SLLDWSINQS 
LDLFSAPIDE EELPFPQLLA NVGNEATPVD ILASRTNIPV QEVMMQLLEL ELSGHVVAVS 
GGYIRKGRG