Gene VIBHAR_00342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00342 
Symbol 
ID5555896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp328209 
End bp328883 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID640905836 
Producthypothetical protein 
Protein accessionYP_001443591 
Protein GI156972684 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT TTACCCCTGC GCAGCAACGC AACGCCCTTA TCTATCTGGT TCTATTCCAC 
TTAGTTATTA TTGCATCTAG CAATTATCTA GTTCAGCTAC CGTTTACTAT CTTCGGTTTC
CATACCACTT GGGGTGCATT CACTTTCCCA TTTATCTTCT TAGCGACTGA TTTAACCGTA
CGTATTTTCG GTGCTCAGTT GGCGCGTAAG ATCATCTTCT TGGTGATGTT GCCAGCTTTG
GCAGTGTCTT ACTTCTTATC GGTGGTGTTC TTCGAAGGTC AATTCCAAGG TTTCGGTCAC
CTAGGGGAAT TTAACTTATT CGTTGCTCGT ATCGCGATTG CTAGCTTCAT GGCGTACCTA
CTTGGTCAGA TCATGGATGT GCACGTGTTC AACCGCTTAC GTCAAATGAA GCAATGGTGG
GTGGCACCAA CGTGTTCAAC GCTTTTCGGT AATGCACTTG ATACCATCGC TTTCTTCGCC
ATTGCGTTCT ACCAAAGCCC AGACCCATTT ATGGCGGATC ATTGGACGGA AATCGCGCTG
GTGGATTACG GCTTCAAACT GATTATCAGT CTTGGTTTGT TCGTCCCTAT GTACGGCGTA
CTACTGAATT ACCTAATTAA GAAGCTGACA GCGGTGAACC CTGATTTTAA GGTGACCACA
AGCGTTCAGT CTTAA
 
Protein sequence
MSNFTPAQQR NALIYLVLFH LVIIASSNYL VQLPFTIFGF HTTWGAFTFP FIFLATDLTV 
RIFGAQLARK IIFLVMLPAL AVSYFLSVVF FEGQFQGFGH LGEFNLFVAR IAIASFMAYL
LGQIMDVHVF NRLRQMKQWW VAPTCSTLFG NALDTIAFFA IAFYQSPDPF MADHWTEIAL
VDYGFKLIIS LGLFVPMYGV LLNYLIKKLT AVNPDFKVTT SVQS