Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00275 |
Symbol | |
ID | 5554919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 267755 |
End bp | 268597 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640905770 |
Product | peptidase |
Protein accession | YP_001443530 |
Protein GI | 156972623 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAT TGGTAACGTT AAATAATCCA CGAATGGCGC AAGCTTTTAT TGATTACATG GCTTCACGCC ACATTGATAT TCAAATGATG CCGGAAGGCG AGGGGCAATT TGCTCTTTGG CTGACGGACG CGCAGCATGA AATTGAAGTC GAAGCTGAGC TTAAACAGTT CTTGGCTAAT CCATCTGCTT CGAAATACAG CGCCGCCTCG TGGGACGTTG CCGATTCGCG TAAGAGCAAA TTTCATTACT CCAGCCCGAG TATCATGGGC ATGGTGAAGG CCAAAGCTGG GCCAGTGACC TTACTGATCA TGGCTGTTTG TACGGTTATC TACTTTTTGC AGATGTTCGG TTTTGGTGAT GGCGTGTTTG CTCTGCTGCA TTTCCCAGCT TTCGGAGGGC AGCAGTGGCA ACTCTGGCGC TGGATCAGCC ATGCATTGCT GCACTTCTCC GTTACCCACA TCGTGTTCAA CCTATTGTGG TGGTGGCAAT TCGGTGGTGA TATCGAGCGA CGTTTAAGTT CTGGTAAGTT ACTGCAAATT TTCCTGATTT CTGCCGCGCT ATCTGGTGCA GGTCAGTTCT ACGTGGAAGG TGCGAACTTT GGTGGTTTAT CTGGTGTGGT TTATGCGTTG CTTGGTTACT TGTGGATCCT TGGTTACCGT TGCCCACATC TTGGTTTGAC CCTACCGAAA CCGATCATTG GCCTTATGTT AGTGTGGCTA GTGCTTGGCT TTGTTCAGCC ATTTATGGCG ATTGCCAACA CGGCGCACTT GGTGGGCTTG CTTTCAGGTA TGGCGATTGC ACTGTTTGAT TCTGGTAAAC AGAAATACCA ACAAGCTTCA TAA
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Protein sequence | MKRLVTLNNP RMAQAFIDYM ASRHIDIQMM PEGEGQFALW LTDAQHEIEV EAELKQFLAN PSASKYSAAS WDVADSRKSK FHYSSPSIMG MVKAKAGPVT LLIMAVCTVI YFLQMFGFGD GVFALLHFPA FGGQQWQLWR WISHALLHFS VTHIVFNLLW WWQFGGDIER RLSSGKLLQI FLISAALSGA GQFYVEGANF GGLSGVVYAL LGYLWILGYR CPHLGLTLPK PIIGLMLVWL VLGFVQPFMA IANTAHLVGL LSGMAIALFD SGKQKYQQAS
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