Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00205 |
Symbol | |
ID | 5553956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 202571 |
End bp | 204745 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640905701 |
Product | lysine decarboxylase |
Protein accession | YP_001443472 |
Protein GI | 156972565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA GCGCCCTCAT TCGCCTTGGA GATGTCCAAA TGAATATATT CGCTATTTTG AACCACATGG GTGTGTTCTT TAAAGAAGAG CCAGTTCGTC AACTTCACGC TGCTCTTGAG AAAGCGGGCT ACGAAGTGGT TTACCCAGTA GATGACAAAG ACTTGATCAA AATGATTGAG ATGAACCCAC GCATTTGCGG TGTGCTGTTC GACTGGGATA AATACTCACT AGAGCTATGT GAACGTATTA GCCAAATCAA CGAAAAACTT CCTGTTCACG CATTTGCTAA TGAACAGTCT ACTCTAGACA TTTCACTAAC AGACCTACGT CTAAACGTGA GCTTCTTCGA GTATGCTTTA GGTATGGCTG ACGACATCGC TATCAAAATC AACCAAGCGA CAGAGGCATA CAAAGATGCC ATCATGCCTC CATTCACTAA AGCGCTATTT AAATACGTGG AAGAAGGTAA ATACACCTTC TGTACTCCAG GTCACATGGG TGGTACTGCA TTCCAGAAAA GTCCTGCTGG TAGTATCTTC TACGATTTTT ACGGTCCAAA CACATTCAAA GCGGACGTAT CAATCTCAAT GCCTGAGCTA GGTTCTCTAC TAGACCACTC AGGTCCACAT AAAGATGCAG AAGAATACAT TGCACGTACA TTCAATGCGG ATAGCTCTTA CATCGTAACT AACGGTACGT CTACATCGAA CAAAATCGTT GGTATGTACT CAGCGCCTGC AGGCAGCACA GTACTGATTG ACCGTAACTG TCACAAGTCT CTGACTCACC TAATGATGAT GAGCGACGTG ACACCAATCT ACTTCCGCCC AACTCGTAAC GCATACGGCA TTCTTGGTGG TATTCCACAA AGTGAATTCA GCCGTGATGT CATTGCAGAG AAAGTGGCGA AAACACCAGG TGCAACAGCG CCAAGTTACG CAGTAGTGAC TAACTCAACT TACGATGGCC TGCTGTACAA CACGCAATTC ATCAAAGAGT CGCTAGATTG TAAACACATT CACTTCGACA GTGCTTGGGT GCCTTACACT AACTTCAACC CAATTTACGA AGGTAAATGT GGTATGAGTG GTGAAGCGAT GCCAGGCAAA GTGTTCTACG AGACACAATC AACACACAAA CTGTTGGCGG CATTCTCACA AGCTTCAATG ATTCACGTGA AAGGTGACTT TGATAAAGAA TCTTTCAACG AAGCATTCAT GATGCACACT TCAACTTCAC CTCAGTACGG CATTGTTGCT TCTACTGAAA CTGCAGCGGC AATGATGCGC GGCAACACTG GTAAGAAGTT GATGCAAGAT TCTATCGATC GCGCAATTCG CTTCCGTAAA GAGATCAAAC GTCTAGAAGC AGAAAGCGAC AGCTGGTTCT TCGATGTATG GCAACCAGAA AATATCGATA GCACTGAATG CTGGAAACTA GACCCTAGCG ATACGTGGCA TGGCTTCAAG AACATGGATG ACAACCACAT GTATCTTGAT CCAATCAAAG TAACGCTACT GACTCCAGGG ATGAATAAAG AAGGCGAACT AGAAGAATCA GGTATTCCTG CTTCGCTGGT GGCTAAATTC CTAGACGAGC GCGGCATCGT GGTAGAGAAA ACAGGTCCAT ACAACTTGTT GTTCCTATTC TCAATCGGTA TCGACAAATC AAAAGCAATG CAATTGCTAC GCGGCCTAAC TGAATTTAAA CGTGGCTACG ACTTGAACCT AACCATCAAG AGCTTCCTAC CTTCGCTATA CAACGAAGAC CCAAGCTTCT ATGAAGGTAT GCGCGTTCAA GAACTAGCAC AAGCAATTCA CAACTTAACT AAGAAATACA ACCTACCAGA GCTAATGTAC AAAGCGTTCG ATGTTCTTCC TGAAATGAAA GTAACACCAC ACGCAGCATG GCAAGAAGAG CTTCGCGGTA ACGTAGAAGA AATCAAACTG GAAGAAATGG TTGGTCGCGT AAGTGCGAAC ATGATCCTTC CTTATCCTCC AGGTGTGCCA CTAGTACTTC CTGGTGAAAT GGTGACTCAA GAGTCTCGCC CTGTGCTGGA CTTCCTAGAG ATGCTTTGTG AGATCGGTGC GCATTACCCA GGTTTCGAAA CCGACATCCA CGGTCTATAC CAACAAAAAG ATGGTAGCTA CACCGTAAAA GTATTGAAGA ACTAG
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Protein sequence | MAKSALIRLG DVQMNIFAIL NHMGVFFKEE PVRQLHAALE KAGYEVVYPV DDKDLIKMIE MNPRICGVLF DWDKYSLELC ERISQINEKL PVHAFANEQS TLDISLTDLR LNVSFFEYAL GMADDIAIKI NQATEAYKDA IMPPFTKALF KYVEEGKYTF CTPGHMGGTA FQKSPAGSIF YDFYGPNTFK ADVSISMPEL GSLLDHSGPH KDAEEYIART FNADSSYIVT NGTSTSNKIV GMYSAPAGST VLIDRNCHKS LTHLMMMSDV TPIYFRPTRN AYGILGGIPQ SEFSRDVIAE KVAKTPGATA PSYAVVTNST YDGLLYNTQF IKESLDCKHI HFDSAWVPYT NFNPIYEGKC GMSGEAMPGK VFYETQSTHK LLAAFSQASM IHVKGDFDKE SFNEAFMMHT STSPQYGIVA STETAAAMMR GNTGKKLMQD SIDRAIRFRK EIKRLEAESD SWFFDVWQPE NIDSTECWKL DPSDTWHGFK NMDDNHMYLD PIKVTLLTPG MNKEGELEES GIPASLVAKF LDERGIVVEK TGPYNLLFLF SIGIDKSKAM QLLRGLTEFK RGYDLNLTIK SFLPSLYNED PSFYEGMRVQ ELAQAIHNLT KKYNLPELMY KAFDVLPEMK VTPHAAWQEE LRGNVEEIKL EEMVGRVSAN MILPYPPGVP LVLPGEMVTQ ESRPVLDFLE MLCEIGAHYP GFETDIHGLY QQKDGSYTVK VLKN
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