Gene VIBHAR_00170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00170 
Symbol 
ID5555290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp173917 
End bp174456 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content45% 
IMG OID640905666 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001443445 
Protein GI156972538 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCGGTT TTAACAAAAA AATCGTGCTG AATTATCGTA TATTTGGGAA TATAAACGTT 
CCACTCACGA TAAAGGAAGA TAGCAACATA ATGTCTGCAA AGTCACGGAT TCTAGTTCTA 
AACGGACCAA ATCTTAATCT ATTAGGTCTG CGTGAACCGA CACATTACGG TAACAACACC 
CTAGCACAGA TTGTTGACGC ATTGACTGAA CAAGCTCACA ACTCTGGGGT GGAACTTGAA 
CACCTGCAAT CGAATCGTGA GTACGAACTG ATTGAAGCTA TCCACGCTGC GTACGGCAAA 
GTGGACTTCA TTATCATCAA CCCAGCGGCT TTCACTCACA CCAGTGTCGC GCTGCGTGAT 
GCATTACTTG GCGTAGCCAT CCCATTTATC GAAGTGCACC TATCGAACGT TCATGCTCGT 
GAGCCGTTCC GTCATCACTC TTATCTGTCT GATAAAGCAG AAGGGGTGAT TTGTGGCTTA 
GGTGCACAAG GTTATGAATT CGCTCTGTCT GCAGCAATCG CGAAATTGCA GGCAAAGTAA
 
Protein sequence
MLGFNKKIVL NYRIFGNINV PLTIKEDSNI MSAKSRILVL NGPNLNLLGL REPTHYGNNT 
LAQIVDALTE QAHNSGVELE HLQSNREYEL IEAIHAAYGK VDFIIINPAA FTHTSVALRD 
ALLGVAIPFI EVHLSNVHAR EPFRHHSYLS DKAEGVICGL GAQGYEFALS AAIAKLQAK