Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00123 |
Symbol | |
ID | 5554950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 121450 |
End bp | 121935 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640905619 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_001443398 |
Protein GI | 156972491 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATTA AGGATTTAAA AATGGCTGAA GCAGCACCAC AAGACGCACA ACAAAACTTT GCAATTCAAC GCATCTTCCT AAAAGACGTT TCTTTCGAAG CGCCTAACTC TCCAGTAATG TTCCAAAAAG AGTGGAACCC AGACGTAAAA CTAGACCTAG ACACTCAAAG CCGTGAGCTT GGTGAAGGGG TTTACGAAAT TGTTCTACGT CTAACCGTTA CTGTTAAGAA CGAAGAAGAA ACTGCGTTCC TATGTGAAGT TCAACAAGGT GGTATCTTCA CTGCTGAGAA AATGGAAGCA GGTCAACTTG CACATTGCCT AGGCGCATTC TGCCCGAACA TCCTATTCCC ATACGCTCGT GAAACTATCT CAAGCCTAGT AGTTAAAGGT ACGTTCCCTC AACTGAACCT AGCGCCAGTT AACTTCGACG CACTATTCAT GAACTACCTA CAACAGCAAG CTCAACAAGG CGAAGCTGAA GCGTAA
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Protein sequence | MFIKDLKMAE AAPQDAQQNF AIQRIFLKDV SFEAPNSPVM FQKEWNPDVK LDLDTQSREL GEGVYEIVLR LTVTVKNEEE TAFLCEVQQG GIFTAEKMEA GQLAHCLGAF CPNILFPYAR ETISSLVVKG TFPQLNLAPV NFDALFMNYL QQQAQQGEAE A
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