Gene VIBHAR_00123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00123 
Symbol 
ID5554950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp121450 
End bp121935 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID640905619 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001443398 
Protein GI156972491 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTA AGGATTTAAA AATGGCTGAA GCAGCACCAC AAGACGCACA ACAAAACTTT 
GCAATTCAAC GCATCTTCCT AAAAGACGTT TCTTTCGAAG CGCCTAACTC TCCAGTAATG
TTCCAAAAAG AGTGGAACCC AGACGTAAAA CTAGACCTAG ACACTCAAAG CCGTGAGCTT
GGTGAAGGGG TTTACGAAAT TGTTCTACGT CTAACCGTTA CTGTTAAGAA CGAAGAAGAA
ACTGCGTTCC TATGTGAAGT TCAACAAGGT GGTATCTTCA CTGCTGAGAA AATGGAAGCA
GGTCAACTTG CACATTGCCT AGGCGCATTC TGCCCGAACA TCCTATTCCC ATACGCTCGT
GAAACTATCT CAAGCCTAGT AGTTAAAGGT ACGTTCCCTC AACTGAACCT AGCGCCAGTT
AACTTCGACG CACTATTCAT GAACTACCTA CAACAGCAAG CTCAACAAGG CGAAGCTGAA
GCGTAA
 
Protein sequence
MFIKDLKMAE AAPQDAQQNF AIQRIFLKDV SFEAPNSPVM FQKEWNPDVK LDLDTQSREL 
GEGVYEIVLR LTVTVKNEEE TAFLCEVQQG GIFTAEKMEA GQLAHCLGAF CPNILFPYAR
ETISSLVVKG TFPQLNLAPV NFDALFMNYL QQQAQQGEAE A