Gene VIBHAR_00112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00112 
Symbol 
ID5554366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp107370 
End bp107915 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID640905608 
Productoligoribonuclease 
Protein accessionYP_001443387 
Protein GI156972480 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTTA GCGATCAAAA CCTGATTTGG GTGGATTTAG AGATGACAGG CCTCGATCCT 
GAAACGCACA AAATCATCGA AATTGCTTCT ATCGTCACGG ATAGTGAATT GAATATTTTG 
GCTGAAGGTC CTGTTCTTGC TGTACATCAG CCTGAAGAAG AGCTGGTGAA GATGGATGAT 
TGGTGTACCA ATACGCACAC TTCAAGTGGC TTGGTTGAGC GCGTTCGTAA CAGTGATGTT 
TCTGAACAAG ATGCTGTTGC GCAGACCATC GAATTTCTTG AGAAATGGGT ACCAAAGGGT 
GTTTCTCCAA TTTGTGGTAA CAGCATTGGT CAGGATCGCC GTTTCTTGTA CAAGCATATG 
CCTGAATTGG AAGAATACTT CCACTACCGT TATTTGGACG TGAGCACGCT AAAAGAACTG 
ACTCGCCGCT GGAAACCAGA AGTGTTAGAC GGTTTTTCGA AGCAGGGCAC GCATCTAGCA 
TTGGATGATA TCCGTGAGTC GATTGCTGAG CTAAAGTACT ACCGCGAAAC GATCTTTAAG 
ATCTAA
 
Protein sequence
MSFSDQNLIW VDLEMTGLDP ETHKIIEIAS IVTDSELNIL AEGPVLAVHQ PEEELVKMDD 
WCTNTHTSSG LVERVRNSDV SEQDAVAQTI EFLEKWVPKG VSPICGNSIG QDRRFLYKHM 
PELEEYFHYR YLDVSTLKEL TRRWKPEVLD GFSKQGTHLA LDDIRESIAE LKYYRETIFK 
I