Gene VIBHAR_00091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00091 
Symbol 
ID5555651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp94612 
End bp95592 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content45% 
IMG OID640905587 
Productserine protease 
Protein accessionYP_001443378 
Protein GI156972471 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAGT TAATGATCCC TGTACTGGTC ATCGCACTGG CATTAATGCT GATGTCACTG 
TTTGTGATTC CTGAAGGTGA ACGCGGTATT GTGGTTCGAT TCGGTCGTGT CTTAAAAGAC 
AATAACGACA TCACTCGAAT TTACGAGCCG GGTTTGCATT TTAAAATGCC GCTGTTCGAT 
CGTGTTAAAA AACTGGACGC ACGTATCCAA ACAATGGATG GCCGTGCTGA CCGTTTCGTA 
ACGTCTGAGA AAAAAGACGT AATCATCGAT ACCTACGCGA AGTGGCGTAT TGAAGATTTC 
GGTCGTTACT ATCTAGCGAC TGGTGGCGGT AACACGCTGA CAGCTGAAGC ACTTTTAGAG 
CGTAAAGTAA CTGACGTTTT ACGTTCAGAA ATTGGTTCGC GTGAAATCAA GCAGATTATT 
TCAGGGCCAC GTAAGAAGAG CCAAGATTTG GTCGGCGAAG TTGAAGGTGA ACTAACGACT 
GAAGCCGCTC TTAAAGCTCT CGAAATTGAT GGTGAACGTG ATGTGATTAT GTCTGAAGTT 
CTCAGCGATA CGCGAGAAAG TGCGATGAAA GACCTTGGTG TTAGGGTTGT TGATTTTCGT 
ATTAAGAAAA TCAACCTACC TGATGAAATC AGTGAGTCGA TTTACCGTCG TATGCGTGCA 
GAACGTGAGT CAGTAGCGCG TAAGTTCCGC TCTCAAGGTC GTGAGAAAGC AGAAGTCATC 
CGTGCACAAG CTGAGCTTGA AGTGGCAACG ATTCTTGCAG AAGCAGACAA AACAGCTCGT 
GTAACACGAG GTGCAGCAGA TGCAGAAGCG GCGAAGATCT ACGCAGATGC GTACAATAAA 
GATCCTGAGT TCTTCAGCTT CCTACGCTCT CTAAAGGCTT ACGAGAAATC GTTCAGCTCT 
AAGAGTGACA TCCTTGTTCT GGATCCGAAG AGTGAATTCT TCCAATACAT GAACAATGCG 
AAAGGCGCAG AAGCGAAATA A
 
Protein sequence
MRKLMIPVLV IALALMLMSL FVIPEGERGI VVRFGRVLKD NNDITRIYEP GLHFKMPLFD 
RVKKLDARIQ TMDGRADRFV TSEKKDVIID TYAKWRIEDF GRYYLATGGG NTLTAEALLE 
RKVTDVLRSE IGSREIKQII SGPRKKSQDL VGEVEGELTT EAALKALEID GERDVIMSEV 
LSDTRESAMK DLGVRVVDFR IKKINLPDEI SESIYRRMRA ERESVARKFR SQGREKAEVI 
RAQAELEVAT ILAEADKTAR VTRGAADAEA AKIYADAYNK DPEFFSFLRS LKAYEKSFSS 
KSDILVLDPK SEFFQYMNNA KGAEAK