Gene VIBHAR_00088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00088 
Symbol 
ID5555712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp91956 
End bp92591 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content50% 
IMG OID640905584 
Productsodium-type polar flagellar protein MotX 
Protein accessionYP_001443375 
Protein GI156972468 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC GAACAGTGGC TGCTTCACTG TTATTGATGC TGAGTGCGAC ATCGGCTAAG 
GCAAATGTTG CCGATGTAGG GGCGCCTGTC CCCATCTACA CCGAAGCAGA GCTTATAAAG 
CTTATTGAGC AAAATAAGCA CCTAGAGCGC GTGCGCGCTG ATAACTGCCA GTTGGTAGAA 
GATATCGTGG CACGTGCGAC GCGCATTAAC TTGCCGTCTT ATGAATTCCT TTATGGCGAT 
ATGTTGGCGT GGGGCGTGTG TGTAGAACAA GACGTAGAAC TCGGTCTTTA CTACATGGAA 
AACGCAGCTC ACCAAGGTTT GCCAGCTGCA CTAGAGCAGC TAGGTCGCTA TTACTCTCGC 
GGTACTTTAG TCCAACAAGA TAAAGAACGT GCAATCCCAT ACCTGCGAGA AGCGGCGGCA 
ATGGGCAATC TAAATGCGCG TATTCATCTT GCTGAGCTAC TGTTGCGTGA TTATGGCAGT 
CCGCTCGACT ACGAAGATGC TTACCGTTGG CTGTACAACT CGGTGACTGC CGACCAAAGA 
AAACACAAGC GTATTGCGAT GCTGAGAAAC GGTCTTGAGC AACGCATGCC GCAAAACATT 
ATTGCGCGTG CTAAGCGCCG CGACACCTTC TGGTAG
 
Protein sequence
MKLRTVAASL LLMLSATSAK ANVADVGAPV PIYTEAELIK LIEQNKHLER VRADNCQLVE 
DIVARATRIN LPSYEFLYGD MLAWGVCVEQ DVELGLYYME NAAHQGLPAA LEQLGRYYSR 
GTLVQQDKER AIPYLREAAA MGNLNARIHL AELLLRDYGS PLDYEDAYRW LYNSVTADQR 
KHKRIAMLRN GLEQRMPQNI IARAKRRDTF W