Gene VIBHAR_00079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00079 
SymbolargD 
ID5555591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp78706 
End bp79917 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content49% 
IMG OID640905575 
Productbifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein 
Protein accessionYP_001443366 
Protein GI156972459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGG AAAACAAAGT AGAGCGCGGT TTATTCGATG AGGTAATGGT ACCTTGCTAT 
AACCCGATGG AAATGATCCC TGTAAAAGGT GAAGGTTCAC GCATTTGGGA TCAGAACGGA
AATGAATACA TCGACTTTGC TGGTGGTATT GCGGTGAGCT GTCTTGGCCA TTGTCACCCA
GTTATGGTGA ACGCATTGAC TGAGCAAGGT AGCAAGCTTT GGCACCTAAG TAATGTTATG
ACTAATGAGC CTGCACTGCG ATTGGCGAAG AAGCTAACAG AAGTCAGCTT TGCTGAGCGC
GTGTTCTTCG CTAACTCTGG CGCAGAAGCA AACGAAGCGG CACTAAAGCT AGCTCGTCGT
TACGCAGCAG ACGTTCATGG TACTGAGAAG TCTGAAATCA TCGCATTCAA ACAAGGTTTC
CATGGTCGTA CTTTCTTCAC GGTAACGGTA GGCGGTCAAG CGGCTTACTC AGACGGTTTC
GGTCCTAAGC CGGGCGATGT GACACACCTT CCTTACAACG ATATCGAAGC ACTACAAGCA
CACATGTCTG ATCGCACTTG TGCGGTAATG ATGGAGCCTC TACAAGGTGA GGGTGGCATC
ATTCCACCAA CACCTGAATT CGCTCAAGCG GTTCGCGAGC TGTGTGACAA GCACAACGCA
CTGTTGATCT TCGATGAAGT GCAAACTGGT AACGGTCGTA CGGGTCACTT CTATGCATAC
CAAGGTCTAG GTATCACGCC AGACATTCTA AGCACAGCGA AATCACTGGG TGGTGGTTTC
CCTATCGGTG CCATGCTAAC GACGGCAAAA CTGGCTGAGC ACATGAAAGT GGGCACGCAT
GGTTCAACTT ACGGCGGTAA CCCACTAGCG TGTGCGGTTG CAGAAGCGGT TGTTGATGAA
GTGACAAAAC CAGAAGTATT GGCTGGCGTA CTAGAGCGTG AAGCTATGTT CCGTGAAGGT
CTGGAGAAGA TTAACGCGAA ATACAACATC TTCTCTGAAG TGCGTGGTAA AGGTCTACTG
CTTGGTGCAG CACTGAATGA AGAGTGGCAA GGTCGTGCGC GTGACGTACT GGTTGCTGCA
GGTAAACAAG GTCTCATGGT ATTGGTTGCG GGTGCCAATG TCGTACGTTT CACACCATCA
CTCGTTATCA CACAACAAGA AATCGAAGAA GGTTTGGCTA AGCTGGATAA AGCGATCGCT
ACGCTGGTTT AA
 
Protein sequence
MTTENKVERG LFDEVMVPCY NPMEMIPVKG EGSRIWDQNG NEYIDFAGGI AVSCLGHCHP 
VMVNALTEQG SKLWHLSNVM TNEPALRLAK KLTEVSFAER VFFANSGAEA NEAALKLARR
YAADVHGTEK SEIIAFKQGF HGRTFFTVTV GGQAAYSDGF GPKPGDVTHL PYNDIEALQA
HMSDRTCAVM MEPLQGEGGI IPPTPEFAQA VRELCDKHNA LLIFDEVQTG NGRTGHFYAY
QGLGITPDIL STAKSLGGGF PIGAMLTTAK LAEHMKVGTH GSTYGGNPLA CAVAEAVVDE
VTKPEVLAGV LEREAMFREG LEKINAKYNI FSEVRGKGLL LGAALNEEWQ GRARDVLVAA
GKQGLMVLVA GANVVRFTPS LVITQQEIEE GLAKLDKAIA TLV