Gene VIBHAR_00070 details

Gene Information

• Locus tag: VIBHAR_00070
• ID: 5555021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 69186
• End bp: 71105
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640905566
• Product: ABC transporter, ATP-binding subunit
• Protein accession: YP_001443357
• Protein GI: 156972450
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACCT TCTCTGATAT TCAGTTACTG CGTGGCGGTA AACCTCTTTT AGACCAAGCA 
TCTGCAACCA TTCACCCGGG TGACAAAGTG GGTCTGGTTG GTAAAAACGG CTGTGGTAAA 
TCAACTCTGT TTGCCCTACT AAAAGATGAA CTGTCGATTG ATGCAGGCTC ATTTAGCCAA 
CCTCAACATT GGGAATTGGC TTGGGTTGCA CAGGAAACGC CAGCACTCGA CCGTAGCGCA 
CTGGAATACG TCATTGATGG TGATCGTGAG TTCCGCAATC TTGAAGCTCA ACTGGCTGTC 
GCCGAAGAGA AAGACAACGG CACCCTAGTT GCGGAGATCC ATGGCAAGAT TGAAACCATT 
GGCGGTTACA GCATTCGCGC ACGTGCTGCC GAGCTGCTTG ATGGTCTGGG CTTTAGCCAG 
GAGCAAATGA GCTGGAACCT GACTCAGTTC TCGGGTGGTT GGCGTATGCG CCTTAACTTG 
GCTCAAGCGT TGTTGTGTCG TTCTGATCTA TTGTTACTCG ACGAACCAAC CAACCACTTG 
GATTTGGACG CAGTAATGTG GCTAGAGCGC TGGCTACAAA ACTACCCTGG CACACTGATT 
CTGATCTCGC ACGACCGTGA TTTCTTGGAT CCGATCGTTG GTCGCATCAT TCACATCGAG 
AACCAGCAGT TGAACGAATA CACGGGTAAC TACTCGTCAT TCGAAAACCA ACGCGCACAA 
AAGATGGTGC TGCAACAAGC GATGTTCGAG AAGCAACAGA AGCAGATGTC GCACATGCAA 
AGCTACATTG ACCGCTTCCG TTACAAAGCA TCAAAAGCGC GCCAAGCACA AAGCCGTATT 
AAAGCGCTGG AGCGTATGGA GAAGGTACTG CCAGCGCAGT TCGATAACCC ATTTAGTTTC 
CAGTTCCGCG ATCCTGCAGC GCTACCAAAC CCAATCATGA TGATGGATGA AGTCTCAGCA 
GGCTACGGTG ACAACCTGAT CCTAGAGAAG ATCCGCCTTA ACCTAGTGCC GGGTAGCCGT 
ATTGGCCTAC TTGGTCGTAA CGGCGCAGGT AAATCAACCT TGATCAAATT GCTGTCTGGT 
GAGCTAAAAG CGCAAGGCGG CGATCTAACT TACTCGCAAG GCGTGAAGAT CGGTTACTTC 
GCTCAGCACC AACTAGAAAC ACTGCACCCA GAAGAAACAC CGCTTCAACA CATGATGCAA 
ATCGCGCCGG ATCAAACCGA GCAGCAACTA CGTGATTACC TAGGTAGCTT TGGTTTCCAA 
GGTGATAAAG CGCTTGAGAA AGTTGCACCG TTTTCTGGTG GTGAGAAAGC ACGTTTGGTA 
TTGGCATTAA TTGTGTGGCA GAAACCGAAC CTGTTGCTAC TCGATGAACC GACCAACCAC 
TTGGATTTGG ACATGCGCCA AGCATTGACC ATGGCACTGC AAACATTCGA AGGTGCCATG 
GTGATTGTTT CGCACGACCG CTACCTATTG CGTGCAACCA CAGATGATTT GTACCTTGTG 
CACGATCGCC AAGTCGCACC ATTCGACGGC GACTTGAACG ATTACTACAA GTGGTTGACC 
GAGCAACAAA AAGCCGAGCG TAAAGAAGCA CAAGCAGCTC AGCCAGTGAA AGATAACGCC 
AACAGTGCAG CGGCGAAAAA AGAGCAAAAG CGACGCGAAG CAGAATTTCG TAAGCAGACC 
GCACCAATTC GCAAAACGCT GACACAGTTG GAAAACAAAA TGGATAAGTT AGGCGAAGCA 
CTGGCGAAAG CAGAAGAACA GTTATCGGAT AACTCTCTGT ATGAAGCCGA AAACAAAGCT 
AAACTTAACG AAGTGTTGGC GCTTCAAGCT TCTAGCAAAG CAGATCTTGA AGAAGTAGAA 
ATGGAATGGA TGTCTGCCCA AGAAACACTT GAGCAGATGG AACTAGAGTT TAATCAATGA 

 

Protein sequence

MITFSDIQLL RGGKPLLDQA SATIHPGDKV GLVGKNGCGK STLFALLKDE LSIDAGSFSQ 
PQHWELAWVA QETPALDRSA LEYVIDGDRE FRNLEAQLAV AEEKDNGTLV AEIHGKIETI 
GGYSIRARAA ELLDGLGFSQ EQMSWNLTQF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL 
DLDAVMWLER WLQNYPGTLI LISHDRDFLD PIVGRIIHIE NQQLNEYTGN YSSFENQRAQ 
KMVLQQAMFE KQQKQMSHMQ SYIDRFRYKA SKARQAQSRI KALERMEKVL PAQFDNPFSF 
QFRDPAALPN PIMMMDEVSA GYGDNLILEK IRLNLVPGSR IGLLGRNGAG KSTLIKLLSG 
ELKAQGGDLT YSQGVKIGYF AQHQLETLHP EETPLQHMMQ IAPDQTEQQL RDYLGSFGFQ 
GDKALEKVAP FSGGEKARLV LALIVWQKPN LLLLDEPTNH LDLDMRQALT MALQTFEGAM 
VIVSHDRYLL RATTDDLYLV HDRQVAPFDG DLNDYYKWLT EQQKAERKEA QAAQPVKDNA 
NSAAAKKEQK RREAEFRKQT APIRKTLTQL ENKMDKLGEA LAKAEEQLSD NSLYEAENKA 
KLNEVLALQA SSKADLEEVE MEWMSAQETL EQMELEFNQ