Gene VIBHAR_00057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00057 
SymbolrpsL 
ID5553658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp60043 
End bp60417 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content47% 
IMG OID640905553 
Product30S ribosomal protein S12 
Protein accessionYP_001443344 
Protein GI156972437 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA TTAACCAGTT GGTACGTAAA CCACGTGCAA AGCAAGTTGT TAAAAGCAAC 
GTGCCTGCAC TAGAAGCGTG CCCACAAAAA CGTGGTGTAT GTACTCGTGT TTACACTACT
ACACCTAAAA AACCTAACTC AGCACTTCGT AAAGTTTGTC GTGTACGTCT GACAAACGGC
TTCGAAGTTA CATCGTACAT CGGCGGTGAA GGTCACAACC TTCAAGAGCA CAGTGTTGTA
CTAATCCGTG GCGGTCGTGT AAAAGACCTT CCGGGTGTAC GTTACCACAC TGTTCGCGGT
GCACTTGACT GTGCTGGCGT TAACGACCGT AAACAAGGTC GTTCTAAGTA CGGTGTGAAG
CGTCCTAAGT CTTAA
 
Protein sequence
MATINQLVRK PRAKQVVKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 
FEVTSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG ALDCAGVNDR KQGRSKYGVK
RPKS