Gene VIBHAR_00049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00049 
Symbol 
ID5556390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp51510 
End bp52670 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content48% 
IMG OID640905545 
Productcystathionine gamma-synthase 
Protein accessionYP_001443336 
Protein GI156972429 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR02080] O-succinylhomoserine (thiol)-lyase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC GTAAGCCTGC AACCATTGCT GTACGCACTG GTATCGAGTC AGACAGTCAA 
TACCACGCTG TTGTACCACC AATCTACCTT TCGACTAACT ATGGCTTCCC AGCGTTTGGT 
GAAGTCCCAC AATATGATTA CACCCGTTCT GGTAACCCTA ACCGAGGTTT GCTCGAGCAA 
GCGTTGTATG AGCTTGAATC AGGCAAAGGT GCGGTTGTCA CTAACTGCGG TACATCAGCG 
CTAAACCTTT GGGTATCGGC ATTTCTTGGT CCTGATGACT TAATTGTTGC ACCACACGAT 
TGTTACGGCG GTACTTATCG TCTTTTCAAT ACTCGTGCGA ACAAGGGTGA TTTTAAAGTG 
CAGTTTGTCG ATCAGTCGGA TCAGCAAGCT TTGGATGCGG CGATTGCGAA AAAGCCAAAG 
CTTATCTTGC TAGAAACACC GTCTAACCCG CTTGTGCGCG TGGTCGATAT TGCCGCTGTG 
TGTGAAAAGG CAAAACAAGT CGGCGCACTG GTTGCCGTGG ACAATACCTT TTTGACACCT 
GTGTACCAAA AGCCTTTGGA GCTAGGTGCG GATTTTGTTA TCCACTCAAC GACGAAATAC 
ATTAATGGTC ACTCAGATGT AATTGGTGGA GTGGTGATCA CCAAGACTGA AGAGCATGCT 
GAAGAACTGG CATGGTGGGG TAACTGCATT GGTGCAACGG GTACGCCATT CGACAGCTAC 
ATGACACTTC GAGGAATTCG TACGTTGGGT GCACGAATGC GAGTTCACGA AGAAAGCTCT 
CAGCAAGTGT TAGCGTATTT GCAAACGCAA TCTTTGGTGG CGAAGATCTA TCATCCAAGT 
TTGCCAGAGC ATCCAGGTCA TGACATCGCG AAGAAGCAAC AGTCGGGCTT TGGTTCTATG 
CTGAGCTTTG AGTTTGCTGG CTCATTTGAT CAGCTAAAAG TGTTTGTTAA AGAACTTGAA 
CTCTTTTCTC TTGCAGAATC GCTAGGTGGC GTAGAAAGCT TGATTTGCCA CCCCGCTTCA 
ATGACGCATC GTGCTATGGG TGAAGAAGCA CTGGCTGAAG CAGGTGTCTC TCAACAGTTA 
CTGCGTTTAT CTGTTGGCTT AGAAGATGCG CAAGATCTGA TTGCCGATCT TGAGCAAGCA 
TTCGCGAAAG CAGCACAGTA A
 
Protein sequence
MSTRKPATIA VRTGIESDSQ YHAVVPPIYL STNYGFPAFG EVPQYDYTRS GNPNRGLLEQ 
ALYELESGKG AVVTNCGTSA LNLWVSAFLG PDDLIVAPHD CYGGTYRLFN TRANKGDFKV 
QFVDQSDQQA LDAAIAKKPK LILLETPSNP LVRVVDIAAV CEKAKQVGAL VAVDNTFLTP 
VYQKPLELGA DFVIHSTTKY INGHSDVIGG VVITKTEEHA EELAWWGNCI GATGTPFDSY 
MTLRGIRTLG ARMRVHEESS QQVLAYLQTQ SLVAKIYHPS LPEHPGHDIA KKQQSGFGSM 
LSFEFAGSFD QLKVFVKELE LFSLAESLGG VESLICHPAS MTHRAMGEEA LAEAGVSQQL 
LRLSVGLEDA QDLIADLEQA FAKAAQ