Gene VIBHAR_00044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00044 
Symbol 
ID5555189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp42811 
End bp43947 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content48% 
IMG OID640905540 
Productacetylornithine deacetylase 
Protein accessionYP_001443331 
Protein GI156972424 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAC CAAGCTTTCT AGAGGTCTAT GAAGGACTGA TCAGTACCTC TTCGATCAGC 
TCAACCGATC CAAGCTGGGA TCAAGGCAAT GCCAAAGTGA TCGAGAAGCT AGCTTCTTGG
TTTAAAGATC TTGGCTTCAG CGTTGAAGTG ATCGAAGTGG AACCAGGCAA ACACAATATG
ATCGCACGTA TGGGCGAAGG TGAAGGCGGT CTACTTCTGG CAGGTCACAG CGATACCGTG
CCATTTGATG AAGGGCGCTG GAGTTTTGAT CCGCATAAGC TGACCGAGAA AGACAACCGC
TTTTATGGTT TGGGTACTGC GGATATGAAA GGCTTCTTTG CCTTTATTTA TGAAGCGGTA
AAGAAAATCG ACTGGAGTAA GCAAACCAAG CCGCTTTATG TATTGGCGAC CTGTGATGAA
GAAACCACTA TGCTGGGTGC GCGTCATTTT ACTGAGAATG CGCCTTTTAA GCCGGATTAC
TGCATCATTG GCGAGCCCAC AAGCCTAGTG CCCATTCGTG GTCACAAAGG GCACGTAGCA
AATGCCATTC GCGTAACCGG CAAATCCGGT CACTCATCCG ATCCTGCGCT CGGCGTCAAT
GCCATTGAAA TCATGCATGA AGTCATGTTT GCCATGATGC AACTGCGCGA CAAATTGGTT
AAAGAGTATC ACCATCCGGG TTTTGCCATT CCAAGCCCTA CCCTAAACCT TGGTCATATC
CATGGCGGTG ACAGCGCAAA CCGGATTTGC GGTTGCTGTG AACTGCATTA TGACGTGCGT
CCTCTTCCTG GTATTAGCCT TGATGGTTTA GAGAACATGT TGCGTGGCGC ATTAAAAGAA
GTCGAAGCGA AATGGCCAGG GCGATTAGAG ATTATTCCTC TGCACGATCC AATTCCGGGT
TACGAATGCC AACATGACCA CCCATTTATT GGTGGTGTTG AAGAGATCTG CCAAACCAGT
TCGGAAACCG TTAACTACTG TACTGAAGCA CCATTCCTAC AGCAGTTGTG CCCAACCTTA
GTTCTCGGCC CTGGTTCTAT TGACCAAGCC CACCAGCCAG ATGAATTCCT CTCTTTCGAC
TTTATTGACC CAACCATCGA TGTGCTGTCA CGTGCGATGG TGAAATATTG TTGTTAG
 
Protein sequence
MQLPSFLEVY EGLISTSSIS STDPSWDQGN AKVIEKLASW FKDLGFSVEV IEVEPGKHNM 
IARMGEGEGG LLLAGHSDTV PFDEGRWSFD PHKLTEKDNR FYGLGTADMK GFFAFIYEAV
KKIDWSKQTK PLYVLATCDE ETTMLGARHF TENAPFKPDY CIIGEPTSLV PIRGHKGHVA
NAIRVTGKSG HSSDPALGVN AIEIMHEVMF AMMQLRDKLV KEYHHPGFAI PSPTLNLGHI
HGGDSANRIC GCCELHYDVR PLPGISLDGL ENMLRGALKE VEAKWPGRLE IIPLHDPIPG
YECQHDHPFI GGVEEICQTS SETVNYCTEA PFLQQLCPTL VLGPGSIDQA HQPDEFLSFD
FIDPTIDVLS RAMVKYCC