Gene VIBHAR_00035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00035 
Symbol 
ID5553860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp33091 
End bp33999 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID640905531 
ProductDNA-binding transcriptional regulator OxyR 
Protein accessionYP_001443322 
Protein GI156972415 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCC GAGATTTTGA GTACTTGGTG GCGCTTGCGG AGCACAAGCA TTTTCGAAAA 
GCAGCGGAAG CCTGTTTTGT TAGCCAACCA ACTTTGAGTG GCCAGATTCG TAAACTAGAA
GATGAACTGG GCACGGCATT ACTAGAAAGA AGCAGCCGTC GAGTGCTGTT TACCGATTCT
GGTTTGCAGT TGGTGGAGCA AGCAAAACGC ATCTTAAGTG AAGTAAAAAC CTTCAAAGAT
ATGGCTAGTG GCCAAAGTGG TGCCATGACG GGACCAATGC ATATTGGCTT TATTCCCACC
GTTGGGCCTT ACTTGCTGCC TAAGATCGTT CCTCGATTAA AAGAAGAGTT TCCTGAATTG
GAACTGTTTC TGCATGAGGC TCAAACCCAT CAATTGGTTC GTCAGTTAGA AGAGGGCAAG
TTAGATTGCC TAGTATTAGC CTCTGTTGAT GAGACAGCGC CTTTCAAAGA GATTGAAGTC
TACAATGAGC CGTTGAGCGT TGCTGTACCT TGTGACCATG AATGGGCAGG CTTAGATCAT
ATCGACATGC TGGATCTTAA TGGTCGAACC GTATTGGCGT TAGGCGATGG TCACTGCTTA
CGAGACCAAG CACTTGGATT CTGTTTTGCG GCAGGTGCGA AAGATGATGA ACGTTTTAAA
GCAACGAGCT TAGAAACGCT GCGCAACATG GTGGCTGCGG GCGCGGGGAT TACTTTGTTA
CCTCAGTTGT CCGTACCTCA TGAGAAGAAA AAAGATGGCG TATGTTACGT TCCAGCTGTG
AACCCTACGC CTTCTCGCAG TATTGTTTTA GTTTACCGTC CCGGCTCACC ACTGCGTGCT
CGCTTCGAAG CGTTGGCTTC GACAATTAAA AGTATTCTGG AAGCGAAACA AAACTCTATT
GCAGCTTAA
 
Protein sequence
MNIRDFEYLV ALAEHKHFRK AAEACFVSQP TLSGQIRKLE DELGTALLER SSRRVLFTDS 
GLQLVEQAKR ILSEVKTFKD MASGQSGAMT GPMHIGFIPT VGPYLLPKIV PRLKEEFPEL
ELFLHEAQTH QLVRQLEEGK LDCLVLASVD ETAPFKEIEV YNEPLSVAVP CDHEWAGLDH
IDMLDLNGRT VLALGDGHCL RDQALGFCFA AGAKDDERFK ATSLETLRNM VAAGAGITLL
PQLSVPHEKK KDGVCYVPAV NPTPSRSIVL VYRPGSPLRA RFEALASTIK SILEAKQNSI
AA