| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00034 |
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| Symbol | |
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| ID | 5555650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 30445 |
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| End bp | 33012 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640905530 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_001443321 |
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| Protein GI | 156972414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCA TAAAGCGTTT ATTATTTTTA ACATTGATTT GCATAATTCT TGGAGTCACC
ACAATTTTTG GCTTCTATCA ATACGTGAAG CCTGAATTGC CAGATGTTGC AACCTTAAAA
GATGTTGAAT TACAAACACC TATGCAGGTT TTTAGTCAAG ACGGGAAACT GATCGCACAG
TTTGGTGAGA AACGCCGAAT TCCTGTTACT TACGACGAAA TTCCGCAAGA TTTAATTCAT
GCGCTGATCG CGACCGAAGA TAGCCGATTT TACGAGCACC CAGGTATAGA CCCAATCGGT
ATTACACGTG CGGCAATCGT CGTTGCATTA TCTGGTTCTG CAAAGCAAGG TGCGAGTACC
ATTACTCAGC AGCTAGCGCG TAACTTCTTC CTATCCAACG AGAAGAAGAT CATGCGTAAA
GTGAAAGAGA TCTTCATTGC GATTCACATT GAGCAGCTTT TGACGAAGCA AGAGATCATG
GAACTGTACG TTAACAAGAT CTTCCTTGGT TACCGCTCAT ACGGTTTCGG TGCCGCAGCT
CAGGTTTATT TTGGTAAGAG CCTAAATGAA CTCACGCTAA GTGAAATCGC AACGCTTGCT
GGTATGCCAA AAGCGCCATC GACAATGAAC CCAATTTACT CACTTGAGCG CGCGACAAAC
CGTCGTAATG TCGTTCTGAT GCGTATGTTG GATGAGAAAT ACATCACTCA AGAGCAATAC
GATGAAGCAC GTGCTGAGCC AATTGTTGCT CGCTACCACA GTGCTGAGAT TGAGCTTTCT
GCCCCATACG TTGCAGAGCT TGCGCGCTCG TGGGCAGTGA AAGAGTACGG TGCAGAAAAA
GCCTATACCT CTGGCTTAAA CATCTACATG ACAGTAGATT CAAAACTGCA AGATGCAGCA
AACAAAGCGG CGATCAATAA CATCCTTGCT TACGACGAGC GTCATGGCTA CCGCGGTGCT
GAGAAAGTAT TGTGGAAACA AGGTGAAACC GCTTGGGATA CAGAGCAGAT TGAAAAACAT
CTGAAGAAGC AACCAACTTA CGGACAACTT TACCCAGCGG TCGTGACTAA AGTCGATGAC
AAAACAGCGC AAGTTTGGGT CAAGAACAAC GATGAACAAA CCATCGCATG GACTGGCATG
AACTGGGCTC GTAAGTACCT GACGGATGAA CGCCAAGGCG CCGTACCAAA GTCAGCTAAA
CAGATTTTGG AATCAGGCCA ACAAATTTGG GTTCGTGAAA TCAGCACAAC CGATAAAGAC
GGCAACACCA TCAACAGCTG GAAGCTAAGC CAAGTACCAA GTGCAAACAC GGCATTTGTG
GCAATGAATC CGGAAAACGG TGCTGTGCTT TCTCTGGTTG GTGGCTTTAA CTTTGTTCAC
AGCAAGTTTA ACCGTGCGAC TATGTCAGTG CGCCAAGTAG GTTCAAGTAT CAAACCTTTC
ATCTACTCAG CGGCAATAAA CAAAGGTCTC ACTCTTGCTT CTCTAGTGAA CGATGCGCCA
ATCAACAAAT GGGATGCAGG TTCTGGTTCT GCATGGCGTC CAAAGAACTC ACCACCAACA
TACGTGGGCC CTACTCGTCT GCGTATCGGT CTAGCACAGT CTAAAAACGT AATGGCAGTC
CGTACTCTTC GTGAAGTTGG TTTGGACGAG ACTCGTGAAT ATCTAACGCG TTTTGGCTTT
GATATTGATG AAGTACCACG TTCAGAGACC ATCGCGCTTG GTGCAGGTAG CTTAACGCCA
ATGAAAGTGG CACAAGGTTA CTCTGTATTT GCCAACGGCG GTTACTATGT AGAACCTTTC
TACATTGACC ATGTAGAAGA CTCATTTGGT GAAGTGCTGT TTAAAGCAAA CCCGAAAGTG
ATCTGTCAGC ACGATTGCCC TCAAATGGAA CAGCACGTTC CAGATGAAGA TAAGTTTGCT
GCAGAGTTTG GTGAACAAGA CGTAACGCCG GAAAATATCG CTCCAGACAA CGCTCTAGAA
AACGATACTC CGCAATACGC AAAACAAGTT ATCTCAGCTC AAAACGCGTT CCTGATGCGT
GAAATGATGT ACAGCAACAT CTGGGGTGGC GGTAGCTGGC GTGATGGCAC AGGTTGGAAC
GGTACTGGCT GGCGTGCACA GAAACTTGAA CGTCGCGATA TCGGCGGTAA AACCGGTACA
ACCAACGACT CAAAAGATAC TTGGTACAAC GGTTACGGCC CTGGCATCGT GGCTATCGCA
TGGGTTGGTT TCGATGACCA CTCTCGTACG CTTGGCCGCA CAACAGTGAA CAGCAACCTT
GGTAAAGGCC AGATCTCTGG TGCAGAATCA GGTGCTAAGA CGGCTGAGCC AGCTTGGATT
GACTTCATGC ATGCTGCTTT AGAGGGTAAA CCACAGCAGA GCAAGAACAT TCCAGATGAT
ATCGTTCGTG TACGTATCGA CCGTGATAGC GGCCTATTGA CGCACAAAGT CGATGGCTCA
TCAATGTTCG AATACTTCGA GAAAGGTACA GAGCCAACTG AGTACGTCGG TAACAGTCTA
GAAGACAGTA TCTACTCTGG TGGCAGTGGC TCAGAAGAGC TGTTCTAA
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| Protein sequence | MKFIKRLLFL TLICIILGVT TIFGFYQYVK PELPDVATLK DVELQTPMQV FSQDGKLIAQ
FGEKRRIPVT YDEIPQDLIH ALIATEDSRF YEHPGIDPIG ITRAAIVVAL SGSAKQGAST
ITQQLARNFF LSNEKKIMRK VKEIFIAIHI EQLLTKQEIM ELYVNKIFLG YRSYGFGAAA
QVYFGKSLNE LTLSEIATLA GMPKAPSTMN PIYSLERATN RRNVVLMRML DEKYITQEQY
DEARAEPIVA RYHSAEIELS APYVAELARS WAVKEYGAEK AYTSGLNIYM TVDSKLQDAA
NKAAINNILA YDERHGYRGA EKVLWKQGET AWDTEQIEKH LKKQPTYGQL YPAVVTKVDD
KTAQVWVKNN DEQTIAWTGM NWARKYLTDE RQGAVPKSAK QILESGQQIW VREISTTDKD
GNTINSWKLS QVPSANTAFV AMNPENGAVL SLVGGFNFVH SKFNRATMSV RQVGSSIKPF
IYSAAINKGL TLASLVNDAP INKWDAGSGS AWRPKNSPPT YVGPTRLRIG LAQSKNVMAV
RTLREVGLDE TREYLTRFGF DIDEVPRSET IALGAGSLTP MKVAQGYSVF ANGGYYVEPF
YIDHVEDSFG EVLFKANPKV ICQHDCPQME QHVPDEDKFA AEFGEQDVTP ENIAPDNALE
NDTPQYAKQV ISAQNAFLMR EMMYSNIWGG GSWRDGTGWN GTGWRAQKLE RRDIGGKTGT
TNDSKDTWYN GYGPGIVAIA WVGFDDHSRT LGRTTVNSNL GKGQISGAES GAKTAEPAWI
DFMHAALEGK PQQSKNIPDD IVRVRIDRDS GLLTHKVDGS SMFEYFEKGT EPTEYVGNSL
EDSIYSGGSG SEELF
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