Gene VIBHAR_00032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00032 
Symbol 
ID5555885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp28691 
End bp29266 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID640905528 
Productfimbrial assembly protein PilN 
Protein accessionYP_001443319 
Protein GI156972412 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTATC ACATTAACCT TCTTGCCTGG CGTGAAAACC AACGTGAAGA GCATCGTCGT 
CGTTTTATTG GCTTGATTTT ACTCGGGGCG ATCGCTGCTC TGGGCGTGCA ATGGGGGATC 
AGTAAGTACT ACCAATACCA ACAAGATCAG CAGCAACAGC GCTTGGATTA TCTCGCTCAC 
TATATCTCTC AACTCGATAA ACGTATTGAA GCCATGAAGA TAGCAGAGCA AGAGCACAGC 
AAAATTCTAG AGCGCTTAAA GACCGTTGAG GGGTTGCAAA ATGGGCGCAA TAAAACCACT 
GAGTTTATGA ACCTTATGCC CTCAGTGATC CCTGAAGGCG TCTATGTCGA TAAGATCAAA 
ATGAACGACT ACGAGATTGA GATCTCGGGT ATTTCTGATA GCACCTCTCG TCTTGCCACC 
ATGCTCGATA ATATGGAGCG TTCTGCCAAG CTTCTGGATG TTGATATGCA CTACATTGTA 
CATGGTAAAG CGCGCTTTGG TAAAGAGTTC CAGACGTTCA AAGTCTCCTT CATGTTTAAA 
GACGCCTCTA TAAAAGGAGG TAAGCAGCAT GGTTAA
 
Protein sequence
MLYHINLLAW RENQREEHRR RFIGLILLGA IAALGVQWGI SKYYQYQQDQ QQQRLDYLAH 
YISQLDKRIE AMKIAEQEHS KILERLKTVE GLQNGRNKTT EFMNLMPSVI PEGVYVDKIK 
MNDYEIEISG ISDSTSRLAT MLDNMERSAK LLDVDMHYIV HGKARFGKEF QTFKVSFMFK 
DASIKGGKQH G