Gene VIBHAR_00030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00030 
Symbol 
ID5556006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp27600 
End bp28115 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content49% 
IMG OID640905526 
Productfimbrial assembly protein PilP 
Protein accessionYP_001443317 
Protein GI156972410 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAATA AATCTTTGCT GATGGTTAGT ATGGTGAGTC TGCTGAGTGG TTGCCAAGCC 
AATGATGAGT CACTAACCGA TTTTATTCGC GGTGTAGAAA ACCAAGCACG CCGTGATGTC 
GCCAAACTCC AGCCGACTGA AGAATATGTA GTGGTGAGTT ACGAGCCTGA AATTTTGCGT 
GCCCCTTTTG AACTGCCAAA AGAGGCCACC ATCGCAACTC AACCTGTTGC GAGGCAAGAC 
TGTTGGCAAC CGCCGTCAAG AAAGCGCACA GGCAAACTGG AACGTTTCCC ACTCAACCAA 
CTTCGCCTTA AGGGTGTGAT GGGAATGGGC AGCAGCGTCT CGGGTTTGGT TCAAGCACCG 
AATGGCACAG TTTACAAAGT GAAGCCAGGT CAATACCTCG GACGTAACAA TGGCAAGGTA 
ACCCACGTAT CCCACAGCTA TTTATTGATT AATGAAACCT TGCCAGACGG TTTAGGTTGT 
TGGCAAAAGC GCAAAGTGAA GTTGGCGTTG AGATAG
 
Protein sequence
MRNKSLLMVS MVSLLSGCQA NDESLTDFIR GVENQARRDV AKLQPTEEYV VVSYEPEILR 
APFELPKEAT IATQPVARQD CWQPPSRKRT GKLERFPLNQ LRLKGVMGMG SSVSGLVQAP 
NGTVYKVKPG QYLGRNNGKV THVSHSYLLI NETLPDGLGC WQKRKVKLAL R