Gene VIBHAR_00023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00023 
SymbolrpsF 
ID5554390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp20114 
End bp20503 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content48% 
IMG OID640905519 
Product30S ribosomal protein S6 
Protein accessionYP_001443310 
Protein GI156972403 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT ACGAAATCGT ATTCATGGTG CACCCAGATC AAAGCGAGCA AGTTGCTGGC 
ATGATCGAGC GTTACACTGG TTCAATCACT GAAGCTGGCG GTAAAATCCA CCGTCTAGAA 
GACTGGGGCC GTCGTCAACT GGCTTACCCA ATCAACAAGC TTCACAAAGC TCACTACGTT 
CTAATGAACG TTGAAGCTGG TCAAGAAGTG ATCGACGAAC TAGAAACTGC TTTCCGTTTC 
AACGATGCAG TTCTACGTAA CATGATCATG CGTACTAAAG CGGCTATCAC TGAGCAATCT 
ATCATGCTTA AGCAGAAAGA AGAGCGTGCA GAGCGTGCTC CTCGTCGCGA AGAGCGTGCT 
GAAGCTAAGC CAGAAGCAGC TGCTGAGTAA
 
Protein sequence
MRHYEIVFMV HPDQSEQVAG MIERYTGSIT EAGGKIHRLE DWGRRQLAYP INKLHKAHYV 
LMNVEAGQEV IDELETAFRF NDAVLRNMIM RTKAAITEQS IMLKQKEERA ERAPRREERA 
EAKPEAAAE