Gene VIBHAR_00017 details

Gene Information

• Locus tag: VIBHAR_00017
• Symbol: alr
• ID: 5553814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 15413
• End bp: 16513
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640905513
• Product: alanine racemase
• Protein accession: YP_001443304
• Protein GI: 156972397
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0787] Alanine racemase
• TIGRFAM ID: [TIGR00492] alanine racemase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAGTA ATGCAATGAG CTACATGAAA GCCGCGATGG CATGCATTGA TTTGTCAGCA 
CTGCAGCACA ACTTACAACG AGTAAAACAA CAAGCACCAG ACAGCAAAGT GATGGCGGTG 
GTGAAGGCAA ATGGCTACGG TCATGGTCTT CGTCATGTAG CTAAACACGC TACGCATGCG 
GATGCCTTTG GCGTTGCTCG CATTGAAGAA GCGCTTCAGC TACGCGCGTG TGGTGTGGTG 
AAGCCGATTC TATTACTAGA AGGCTTTTAC TCACCTGGCG ACTTACCCGT ATTGGTGACC 
AATAACATTC AAACGGTTGT CCACTGTGAA GAGCAGTTGG TGGCATTAGA GCAAGCAGAA 
CTCGAAACGC CCGTTGTGGT TTGGCTCAAA ATCGATAGTG GCATGCACAG ACTTGGTGTG 
CGTCCAGAGC AGTACGATGA ATTCATTACA CGCCTGAAAG AGTGTCCAAA TGTGGCGAAA 
CCGCTGCGTT ACATGAGCCA CTTTGGTTGC GCTGATGAAC TGGATAACAG CATCACGACA 
GAGCAAATCG ACTTGTTTAT GTCGCTTACC GCTGGCTGTC AGGGCGAGCG TTCTTTGGCG 
GCGTCAGCAG GCTTGCTTGC TTGGCCACAA AGTCAGTTAG ATTGGGTTCG TCCGGGTATC 
ATTATGTACG GCGTGTCTCC ATTCAACGAT AAAACCGCGC AAGATATGGG TTACAAACCT 
GTTATGACAC TGAAGTCGCA CTTGATCGCA GTACGTGAAG TGAAAAAAGG CGAAAGTGTC 
GGTTACGGCG GCATGTGGAC CAGCGAGCGT GATACCAAAG TCGGCGTGAT TGCGGTGGGT 
TACGGTGATG GCTACCCACG TACAGCGCCA AATGGTACGC CTGTTCTGGT TAATGGACGC 
AAAGTACCAA TTGCAGGCCG TGTTTCTATG GATATGCTGA CGGTCGATTT AGGGCCAGAT 
GCGACTGATA AAGTAAGCGA TGAAGCGATT CTATGGGGCA AGGACTTACC GGTAGAAGAG 
GTAGCAAGCC ACATAGGCAC CATTGCTTAT GAGTTGGTGA CTAAACTGAC TTCTCGTGTC 
GAAATGGAAT ATTCGAAGTA A 

 

Protein sequence

MMSNAMSYMK AAMACIDLSA LQHNLQRVKQ QAPDSKVMAV VKANGYGHGL RHVAKHATHA 
DAFGVARIEE ALQLRACGVV KPILLLEGFY SPGDLPVLVT NNIQTVVHCE EQLVALEQAE 
LETPVVVWLK IDSGMHRLGV RPEQYDEFIT RLKECPNVAK PLRYMSHFGC ADELDNSITT 
EQIDLFMSLT AGCQGERSLA ASAGLLAWPQ SQLDWVRPGI IMYGVSPFND KTAQDMGYKP 
VMTLKSHLIA VREVKKGESV GYGGMWTSER DTKVGVIAVG YGDGYPRTAP NGTPVLVNGR 
KVPIAGRVSM DMLTVDLGPD ATDKVSDEAI LWGKDLPVEE VASHIGTIAY ELVTKLTSRV 
EMEYSK