Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08249 |
Symbol | |
ID | 5552686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 63714 |
End bp | 64121 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640898126 |
Product | site-specific recombinase |
Protein accession | YP_001436116 |
Protein GI | 156936765 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 92 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACAAT ACGCCTACCT TCGAGTTTCT TCAGATAGCC AAGATGTAGC AAACCAGAAA CATGGTATCT ACGAGTATTG CAATCGTGTC GGAATAGTTA ACTTATGCTT TATCGAAGAT GTCGTTACAG GCAAAAAGAA GTGGCATGAA CGTAAACTAG GTGAACTTAT TGATGGAATG GAGGTTGGTG ACAAACTGAT CTTTGCGGAG GTCAGTCGAA TTGCGCGTTC TACACTTCAG GTTCTTGAAG TACTTGAGGT ATGTATGGCC AAGGGCATCG ATGTCTACAT TGCTAAACAG AACATGCAGC TAGATGGTTC CATGCAAGCA AAAATCACAG AAGTGGACCG CAACGGTACT TGGTCTCGCA GCAGAGATAG AACGCGAGTT TATTTCGATG AGAACTAA
|
Protein sequence | MPQYAYLRVS SDSQDVANQK HGIYEYCNRV GIVNLCFIED VVTGKKKWHE RKLGELIDGM EVGDKLIFAE VSRIARSTLQ VLEVLEVCMA KGIDVYIAKQ NMQLDGSMQA KITEVDRNGT WSRSRDRTRV YFDEN
|
| |