Gene VIBHAR_p08249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08249 
Symbol 
ID5552686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand
Start bp63714 
End bp64121 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content43% 
IMG OID640898126 
Productsite-specific recombinase 
Protein accessionYP_001436116 
Protein GI156936765 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones92 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAT ACGCCTACCT TCGAGTTTCT TCAGATAGCC AAGATGTAGC AAACCAGAAA 
CATGGTATCT ACGAGTATTG CAATCGTGTC GGAATAGTTA ACTTATGCTT TATCGAAGAT
GTCGTTACAG GCAAAAAGAA GTGGCATGAA CGTAAACTAG GTGAACTTAT TGATGGAATG
GAGGTTGGTG ACAAACTGAT CTTTGCGGAG GTCAGTCGAA TTGCGCGTTC TACACTTCAG
GTTCTTGAAG TACTTGAGGT ATGTATGGCC AAGGGCATCG ATGTCTACAT TGCTAAACAG
AACATGCAGC TAGATGGTTC CATGCAAGCA AAAATCACAG AAGTGGACCG CAACGGTACT
TGGTCTCGCA GCAGAGATAG AACGCGAGTT TATTTCGATG AGAACTAA
 
Protein sequence
MPQYAYLRVS SDSQDVANQK HGIYEYCNRV GIVNLCFIED VVTGKKKWHE RKLGELIDGM 
EVGDKLIFAE VSRIARSTLQ VLEVLEVCMA KGIDVYIAKQ NMQLDGSMQA KITEVDRNGT
WSRSRDRTRV YFDEN