| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08203 |
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| Symbol | |
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| ID | 5552732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 32440 |
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| End bp | 34218 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640898080 |
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| Product | conjugal transfer protein TraK |
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| Protein accession | YP_001436070 |
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| Protein GI | 156936719 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTAT CGAAAAAGAA AAAAGGAATA TTGTTCGCCA TGTTCCTTTT TTTTACCCTG
CTGTGTTTAA TTGGTGGCTT GTACGGTGGC GGCGCTGCCT ATTACAAGCT CACCAACATC
TCGTTAGAGC ACCTGACGTA TCACAGCCTC TTTGACCAGT GGCAAGCCTA CAGCCACAAC
CCCGACATCA AGAAGTTCTT GGTGATTGGG GTGGCCGTGA GTATCGCCAT CACTTTGTTT
CCGACGCTGA TGGCCATCGT GATAGCCATT GCCAGCCAAG AAAGAGAAGA AATCCACGGC
AGTGCGAAGT TCGCGACCGA CATGGACTTG GCGAACTCTG GTCTTTTCCC TAACCCGAAA
GCCAAGAACA AGAAGCCAAG CATCTTGTTA GGCAAGATGC CCAAAGGCCG CTTTAAAGGC
CGTTTTATCG AGCTAGAGAG CTCGCAGTTT GTTGAAGTCC CTGCCCCAAC CCGAAGCGGT
AAAGGGGTCG GCATAGTTAT CCCTAACTGC GTGACCTATC CCGATTCGTT GGTTTGTGTC
GATATTAAAT TCGAGAACTT GGTTAAAAGC GGCGGATTTC GTCAGCAATG CGGTCAAGCC
GTTTTCTTGT TTGCGCCGGA TGGGTATGCC ATCGATGAGC AAGCGCGAGA GCGCGAAGAG
CTTCGCACAC ATCAATGGAA TCCTTACGAC TACGTTCGCA GAAGTCCCGT GTTTCGAGTG
AGCGATGTGC TCAATATTGC TAACAGCTTA TACCCCATTT CTGGGGATAA GGGCGATATT
TGGAATGAGT TAGCGGGTAA GTTATTTAAA GGGCTCAGTT GTTGGATGCT CGATACCGAG
TCCATTACAG GTATCACGCC CTCTTTGCCC TACGTGCTGA AACTGGGTGG CATCGATGGC
GGCCTAAGAG CATGGATGCG CCGAGAAATC AAAAACGACT ACGTCTCTGA CGATGCGCGT
TTTGAGTTCA ATAACTGCTT GTCGATGGCC GAAGAGACGT ATTCGAGCGT CGAAAGTAAC
TTACTCAGCC CATTGGCGAT ATTCAGTGAC CGCGTCACCG CAGCCGCCGT CAGTGGTTCG
GATTTTGATT TTCGTGAGCT GCGCAAAAAG CGCATGACCA TCTACGTCGG TTGTCAGCCA
GCTAACCTCA AAAACTTTGG CAAGCTGTTC AACTTGTTTT TCGAGCAGCT TATTTCAGAA
AACACCCGCA CCCTACCCGA ACATGACGAC ACCCTGAAAT ATCAGTGTTT GGGTTTGCTC
GATGAGTTCA CCGCCCTTGG CCGAGTAAAG CAAATCGAAA AAGCAATCAG CTACACCGCT
GGTTACAACC TGCGATTTTT AACCATCTAC CAAGACGAAG GCCAACTCGA AGAAGTGTAT
GGCCGAGAGA ACGCAAAAAA CATTCGCAAG AACCACGGCG TTAAGGTGGT GTACCCACCG
AAAGAAGTGG ACGACAACGT TCGCCGCCTT TCTGACACCT TGGGTACCAA AACGGTGAAA
AAACGCAAAG TCAGTCGCAG TACGGGCAAA GGTTCAAGCC GAACAACCAG TGAAGATGAG
CTGAAACGCC CGCTGATGAT GCCGCATGAA ATCGTTGAGC TTGGCTTTGA GAAACACCCG
ATAGCCAAAG AGCTCGGTAT CAAAACCTTG ATATTGAAAG AGAACCAACG CCCGTTCATT
GCAGAGAAAA TCATCTACTT TGAAGAGCCC GTGTTCGCTG AGCGAGTGAA ATACTCCGAG
GCGAATATCC CTGAAATCCC ACGCCTTAAA CTCCATTGA
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| Protein sequence | MALSKKKKGI LFAMFLFFTL LCLIGGLYGG GAAYYKLTNI SLEHLTYHSL FDQWQAYSHN
PDIKKFLVIG VAVSIAITLF PTLMAIVIAI ASQEREEIHG SAKFATDMDL ANSGLFPNPK
AKNKKPSILL GKMPKGRFKG RFIELESSQF VEVPAPTRSG KGVGIVIPNC VTYPDSLVCV
DIKFENLVKS GGFRQQCGQA VFLFAPDGYA IDEQAREREE LRTHQWNPYD YVRRSPVFRV
SDVLNIANSL YPISGDKGDI WNELAGKLFK GLSCWMLDTE SITGITPSLP YVLKLGGIDG
GLRAWMRREI KNDYVSDDAR FEFNNCLSMA EETYSSVESN LLSPLAIFSD RVTAAAVSGS
DFDFRELRKK RMTIYVGCQP ANLKNFGKLF NLFFEQLISE NTRTLPEHDD TLKYQCLGLL
DEFTALGRVK QIEKAISYTA GYNLRFLTIY QDEGQLEEVY GRENAKNIRK NHGVKVVYPP
KEVDDNVRRL SDTLGTKTVK KRKVSRSTGK GSSRTTSEDE LKRPLMMPHE IVELGFEKHP
IAKELGIKTL ILKENQRPFI AEKIIYFEEP VFAERVKYSE ANIPEIPRLK LH
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