| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4427 |
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| Symbol | |
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| ID | 5541940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5694242 |
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| End bp | 5696104 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896525 |
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| Product | hypothetical protein |
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| Protein accession | YP_001434461 |
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| Protein GI | 156744332 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAA TTCGCATCGC TCTCTTGATC ATACCCTTCG TCGCGTTGGC GCTCACTGCC
TGTGAACAAC TCTCGATCGC CGAACAGGAG CGTATCCGGG AAATTCAAAC GGTCGAAGCC
TCGACACCGA CGGCGACGCC CGTTCCGCCA ACTGATACGC CGACGCCATT GCCGCCAACT
GCAACATCGA CTTCCGGTCC GACGCCGACC CCACCGCCGC CAACGCCGAC TCCTGAGCCA
ACGCCGACGC CGCTGCCACC CACGCCAACG CCTAATCCGA TCCTGGCGCA GTTTAGCCTG
TGCAATCAAC AGGTGGGTGA TCCCGGCGGG GGACGGTTCA GTATGCGGGT GACATCCATC
ACCACAACAG TTGATGCGTT TTTTGAACGG CTCGAATTGA CGCTCGACGT TCCTGCCGAC
TCTGTGCTGC CGCACGCTTC GGCGCGCTGC CGACGCGCCC CTGCTGCGTC ACAGATGGTT
GGCGAGGTCG AGGTGACCGG CGCCTATCTG ATCGAAGTTC AGCTCGATGG ATGGCTGCGT
GATGATGCGT TCCGCGCATC GCTTGCGACG CCGACCATCC CGTTGAGCGG CACGCAGGTG
ATGCGTGCGG CTGCATTCCG GGCGCCTCCT GGCGCGATTG CCGGAGCGCA GTTGGTTATC
GGCGTTGATC AACCGTTCCC GTTCCGTCTG CGCCTGGAAG ACAATCCGCT GCGTCTGGTC
ATCGATGTGG CGACGAGCGG ACCGGTCAGT CAGGCGAGCG ACCTTTTGCG TATTCCCGCA
GGCGCACCGG CAGCGCCGGT TGCGCCGATG TTCTATCTTG CCGACGGTGA TATCTGGCGC
ATCAGCAATG GCGCGCCGGA GAATCTGACC GAACGCCTCC GCGCGGGGCA GTTCGGCGAT
GTGACGGCGC TGACCACGCG CCCAAACGCG CCGTTGCTTG CCTTTTGCGC AACCGCGCCG
GGCGCAGTTG CGGCTGATGT CACTGCCGCT TCAACCCTGT GGGTACTGGA GCTGGATAGC
GGTTCGATCC GTCAGTTGTC GCCACCGCCG CGCGGACGCT CATGCGCCGA TCCGGTTCTG
TCGCCGGATG GCACAACTAT CGCCTATGCA GTTGATGAGT CGGGGGGTGC GCCGCCACAA
CTGCGTATTT TTTCGGTGCA GGTCTTCCCC GGTGCTCCAG CCGTGGCGTT GACGCCCTCT
GGCGATGAGT GGAGTCGTTA CGCACCGCAA TGGCTCGATG ATGCGCGCCT AGTGTACGCT
GCGACCGCCG AAGACGGACG GAGGACGCTG TTCCTGCGCG AATCCGATGG CACTGAACTC
GATATTGGCA TGGCGCTGCT GGTATCGGGA ACGGGCGGGC AGCGCAGCGC GCGATACGAT
GGCTTTGGTC GCCTCATAGC AGCACCCGAT GGCAGGGCTA TTGCTGTCGA GGCATTCCGT
ATCGATGGCA GCGGCGCCGA TCTGCTCATC CTGAACCGGT CGGGTGCTGA GATTGAACGT
CTCAGTCCGA TTGCAGCCGG GTTCTGGAAT CGTCCCGTCG CCTGGAGCGC CGATGGCGCG
CTCTACTATC TTTCGACGGC GTGCGCCAGC GACGCGGTGT ATGAGTACAC ACTACACGTG
CGTAGCGCCG ATGGCGGCGA CCGGGTGATC GCCGCTGGAA TCGCAACCGG CGATCTGGGG
GTCTTCACCG TTCATCAGAA TGCACTGGCG TATGTGACCT TCGACCGCCT GCCGGGGGGA
CCGGGAGGTC CGCTCCGTGT TGCGCCGGAT GATCCGGCTG CGCTCTGGTA CTGGGACCTG
GCGGGCAATA CGCGCACGCG TCTGGTGGAA ACCAGACGCG CAATTACTGC TCTGGCGCCG
TGA
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| Protein sequence | MTRIRIALLI IPFVALALTA CEQLSIAEQE RIREIQTVEA STPTATPVPP TDTPTPLPPT
ATSTSGPTPT PPPPTPTPEP TPTPLPPTPT PNPILAQFSL CNQQVGDPGG GRFSMRVTSI
TTTVDAFFER LELTLDVPAD SVLPHASARC RRAPAASQMV GEVEVTGAYL IEVQLDGWLR
DDAFRASLAT PTIPLSGTQV MRAAAFRAPP GAIAGAQLVI GVDQPFPFRL RLEDNPLRLV
IDVATSGPVS QASDLLRIPA GAPAAPVAPM FYLADGDIWR ISNGAPENLT ERLRAGQFGD
VTALTTRPNA PLLAFCATAP GAVAADVTAA STLWVLELDS GSIRQLSPPP RGRSCADPVL
SPDGTTIAYA VDESGGAPPQ LRIFSVQVFP GAPAVALTPS GDEWSRYAPQ WLDDARLVYA
ATAEDGRRTL FLRESDGTEL DIGMALLVSG TGGQRSARYD GFGRLIAAPD GRAIAVEAFR
IDGSGADLLI LNRSGAEIER LSPIAAGFWN RPVAWSADGA LYYLSTACAS DAVYEYTLHV
RSADGGDRVI AAGIATGDLG VFTVHQNALA YVTFDRLPGG PGGPLRVAPD DPAALWYWDL
AGNTRTRLVE TRRAITALAP
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