| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4426 |
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| Symbol | |
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| ID | 5541939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5692164 |
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| End bp | 5694242 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896524 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001434460 |
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| Protein GI | 156744331 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC TTGGCATCGA TATTGGCGGC ACGTTCACCG ACTTTGTGTT GCTCCGCAAT
GGGCGGGTGC GCATCTACAA AACGCTCTCG ACGCCCGATG ACCCGGCGTG TGCGCTTCTT
CAAGGCGTTG ATACGCTCGG CGCGCCGGCA ACCATCGTTC ATGGCACGAC GGTGGCGACC
AATGCGCTGC TCGAACGGCG CGGCGCCGCG ACTGCTCTAG TGACGACCGG CGGCTTCGGT
GATGTGCTGG TGATCGGGCG CGGCAACCGA CCAACGCTCT ACGACCTGAA TGTGACACGG
CTCGATCCGC CGGTTCCTGA AGCCTGGCGC TTCGAACTGA TCGAGCGCAT GCTGCCTGAT
GGTAGTGTGC TGACTCCGCT CGACGACAGC GAACTGGCGC GCCTGGTCGC CTGGATCGGG
GAGCACCCTG TCGAATCGGT TGCGATCTGC CTGCTCCACA GTTATGCCAA TCCATCCCAT
GAGGATCAGG TGATAGCAGC GCTCGACCGG GCGGCGCGCA CGTCGCAGCG CTCCCTGTTC
ATCTTCGCCT CGCACCGCGT TTTGCCGGAA CCGCGCGAGT ACGAGCGCAC CAGCACCACC
GTCGTCAATG CGTATGTCAG TCCCATTCTT GGGCGCTACC TGGATCGCCT CGGTCCGGCG
TTGAGGGATC GGGGCGTGCG CTCCATCCGC ATCATGGCGT CCGATGGTGG GAGCATGGGG
CTGGTGACGG CTCGCGAATT GGCGGCGCGC GCGACCCTTT CCGGTCCAGC TGGTGGTGTT
GTGGGTGCAT ATGCGGTTGC ACGGCGCGCT GGTTTCAATC GGATCATTAC GTTCGATATG
GGGGGAACGT CCACCGATGT CGCGCTGGTG GACGGGACGC TGCCGCACAC ATCTGAGTCG
CAAGTCGGCG GTCTTCCGGT GCGCCTGCCG AGTCTGGACA TTCACACGGT GGGTGCGGGA
GGCGGCTCTC TTGCCCGGAT CGATGCTGGC GGCGCGCTGC GCGTTGGTCC GCAGAGCGCC
GGCGCCGATC CGGGACCGGC GTGCTATGGA CGAGGAACGC TGCCAACCGT GACGGATGCA
AACCTGCTCT TGGGGCGCTT GCAGGCGGAT TATTTCCTGG GCGGGCACAT GACGCTTGAT
GTCGAGCGGG CGCGCATGGC GTTCATAACG CTGGCGCATG ATCTGTTCGG TGCACAAAGC
CCCGATGATG AACAGCGCGC TGCACTCGGT GTAGTGCGCA TCGCCAATGC GCTGATGGAG
CGCGCCATTC GGGCGATTTC GGTCGAGCGC GGCGACGATC CGCGTGATTG CGCGCTGGTG
GCGTTTGGCG GCGCCGGACC GCTGCATGCG GCGCATCTGG CGGCTGCGCT CGGCATCCGC
ACGGTGCTCA TACCGCGCTA TCCGGGGGTG CTCTCGGCGC TTGGCATGAT CGCCGCCGAT
GTCACCCGCG AGAGTAGCCG GGCGTTGCTG ACAACCCTCG ACGCGCTCGA TACCACAACC
CTCGCCGTGC ACATCGCCGC GCTTGCAGAC GAGGCACTGG CGGCGCTTGC AGCCGACGGC
GAGGACCTCA ATGGCTGCCG GATCGAGTGC GTGCTTGATC TGCGCTATGC TGGACAATCG
TATGAACTTC CCACATCGCT GGAGAGCGGT TGGGAAAAGT CGCCGACGCC GCTGACAGAC
CTGGCAGAAC GGTTTCATGC GCTGCACGAG CGGCGCTACG GGCATGCCAT GCGTGAGCGA
CGCATCGAAG CCGTTACGCT GCGGGTGCGT GCCGTCAGCC CGCGCAGCGC CATCGACTTC
GCGCCGGAGG AGTTGCCGCC GCGCGCGTCG CCATTGATGC CGCGCACCGT GGTGCAGGCG
GCGTTGAACG GCGACACCGC AGCACTCGAA CCTGCACCAC TGTACGAACG CGACGACCTG
CGTCCCGGCG ACGCAATCGA CGGACCGGCG ATCATTGCGC AGTTCGATGC CACAACCATT
GCGCCGCCGG GATGGCGTGT CGTCGTGGAT GCAGACCTCA ACCTGATTAT GACGCCGCTG
TCGCCTCGAC TGTCTCCGTC GGCTGTTCCT CCTGCCTGA
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| Protein sequence | MDILGIDIGG TFTDFVLLRN GRVRIYKTLS TPDDPACALL QGVDTLGAPA TIVHGTTVAT
NALLERRGAA TALVTTGGFG DVLVIGRGNR PTLYDLNVTR LDPPVPEAWR FELIERMLPD
GSVLTPLDDS ELARLVAWIG EHPVESVAIC LLHSYANPSH EDQVIAALDR AARTSQRSLF
IFASHRVLPE PREYERTSTT VVNAYVSPIL GRYLDRLGPA LRDRGVRSIR IMASDGGSMG
LVTARELAAR ATLSGPAGGV VGAYAVARRA GFNRIITFDM GGTSTDVALV DGTLPHTSES
QVGGLPVRLP SLDIHTVGAG GGSLARIDAG GALRVGPQSA GADPGPACYG RGTLPTVTDA
NLLLGRLQAD YFLGGHMTLD VERARMAFIT LAHDLFGAQS PDDEQRAALG VVRIANALME
RAIRAISVER GDDPRDCALV AFGGAGPLHA AHLAAALGIR TVLIPRYPGV LSALGMIAAD
VTRESSRALL TTLDALDTTT LAVHIAALAD EALAALAADG EDLNGCRIEC VLDLRYAGQS
YELPTSLESG WEKSPTPLTD LAERFHALHE RRYGHAMRER RIEAVTLRVR AVSPRSAIDF
APEELPPRAS PLMPRTVVQA ALNGDTAALE PAPLYERDDL RPGDAIDGPA IIAQFDATTI
APPGWRVVVD ADLNLIMTPL SPRLSPSAVP PA
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