Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4416 |
Symbol | |
ID | 5541929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5670214 |
End bp | 5670999 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640896514 |
Product | hypothetical protein |
Protein accession | YP_001434450 |
Protein GI | 156744321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.921944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0304901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAAAT TCCTCACCGG CGCCTCTTAT CCGCTGCGCG CTCTCGGCGT TCTCAGACGC CATCCGACAC TCTGGCAGTA TATTATCGTC CCCGTCTTCC TGAATATATT TGTGGGCATC ACTCTCTACG CCGGTTTGCT CGTTGCCGGA TTTCGCGCTA TTGATGGGGT TATCGCCGGT CTGCCCGAAT GGCTGGCATT CATCGCCTGG TTGCTCCGCG CGCTGTTGAT CGTCGTGCTT CTGATTGCAA CCGGTTATGT GCTGGTTCGC TTCGGCGTGG TGATTGGCTC GCCATTCTAC AGCCGTCTCT CGGAACGCCT GGAAGAACGT TTCAGCGGCG TCGTATTCGA TGCGCCCCCG CCGACTGTGG GGAATGTAGC ACGGGATATT GCTCGCGCTC TGCTGTTCGA GATCAAGAAA CTAATCCTGG CGCTGACTAT CGGTGCACCA ACGTTGCTCC TGAATCTCAT TCCGTTCGTT GGTTCATTGC TGGCGACGGC AGGCGGCATT GCGCTCAGTG CAACCATTTC CTGCCTCGAT TTTTTCGATC CGCCGCTCGA GCGGCGCCGA CTGCGCTTTC GCGATAAATT GGGATTCGTG CGACAGGGTT TGCCCGCAAC AGCCGGATTT GGACTGGTCT GTCTCGGTCT GGTGAGTATT CCCCTGATCA ACCTGTTGGC CGTGCCTCTC TGCATCACTG CCGGCACCCT CTTTTACTGC GATAGACACG GAAGTGAGCA TGCATTGTCA GGCAACGGAT CGTCTCCACA GGCTGGATCG AATTAG
|
Protein sequence | MQKFLTGASY PLRALGVLRR HPTLWQYIIV PVFLNIFVGI TLYAGLLVAG FRAIDGVIAG LPEWLAFIAW LLRALLIVVL LIATGYVLVR FGVVIGSPFY SRLSERLEER FSGVVFDAPP PTVGNVARDI ARALLFEIKK LILALTIGAP TLLLNLIPFV GSLLATAGGI ALSATISCLD FFDPPLERRR LRFRDKLGFV RQGLPATAGF GLVCLGLVSI PLINLLAVPL CITAGTLFYC DRHGSEHALS GNGSSPQAGS N
|
| |