Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4387 |
Symbol | |
ID | 5541900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5640513 |
End bp | 5640881 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896487 |
Product | hypothetical protein |
Protein accession | YP_001434423 |
Protein GI | 156744294 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.177424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.972662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG CCGCCAGCCC ACAGTGGTTG CCGCTCGAGC AGGCCGTCCC GCTTGACGTG TTCCGGGCTG AAGTGGAGGC CTGGGCCAGG ACATTGGGGG TGACCCCGCG CGAGGTGCGC TTCCGTCCGA TGAAGCGCAA ATGGGCCAGT TGCTCCTCGC GGGGCCGGCT CACCTTCGAC ACCGACCTCT TGCGTCAGCC CGCCGAGTTT CGCCGTGAAG TCATCGTCCA TGAATTGCTG CACCTCAAAG TGCCCAATCA CGGCAAGTTA TTCAAGGCGT TACTCAACGC CTATCTGGCA TCAGCCGAAA CGGCTTCCTT TGCCGAGGAG GAAAAACCTT TCGTTAACGG AATCATAGGC AAAGATTGA
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Protein sequence | MRKAASPQWL PLEQAVPLDV FRAEVEAWAR TLGVTPREVR FRPMKRKWAS CSSRGRLTFD TDLLRQPAEF RREVIVHELL HLKVPNHGKL FKALLNAYLA SAETASFAEE EKPFVNGIIG KD
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