Gene Rcas_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4387 
Symbol 
ID5541900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5640513 
End bp5640881 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content59% 
IMG OID640896487 
Producthypothetical protein 
Protein accessionYP_001434423 
Protein GI156744294 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.177424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.972662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG CCGCCAGCCC ACAGTGGTTG CCGCTCGAGC AGGCCGTCCC GCTTGACGTG 
TTCCGGGCTG AAGTGGAGGC CTGGGCCAGG ACATTGGGGG TGACCCCGCG CGAGGTGCGC
TTCCGTCCGA TGAAGCGCAA ATGGGCCAGT TGCTCCTCGC GGGGCCGGCT CACCTTCGAC
ACCGACCTCT TGCGTCAGCC CGCCGAGTTT CGCCGTGAAG TCATCGTCCA TGAATTGCTG
CACCTCAAAG TGCCCAATCA CGGCAAGTTA TTCAAGGCGT TACTCAACGC CTATCTGGCA
TCAGCCGAAA CGGCTTCCTT TGCCGAGGAG GAAAAACCTT TCGTTAACGG AATCATAGGC
AAAGATTGA
 
Protein sequence
MRKAASPQWL PLEQAVPLDV FRAEVEAWAR TLGVTPREVR FRPMKRKWAS CSSRGRLTFD 
TDLLRQPAEF RREVIVHELL HLKVPNHGKL FKALLNAYLA SAETASFAEE EKPFVNGIIG
KD