| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4372 |
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| Symbol | |
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| ID | 5541885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5625565 |
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| End bp | 5626653 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896478 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001434414 |
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| Protein GI | 156744285 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.670262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCA GCCATCATGA GCGCCACGCG GCGTCGGTCG GTCGGTTGCG TCGGATGCTT
CTTGGGTTCA GCCTGGCTGT CGTGGCGTTG CTCGCTGCAT GCGGGACGCC GTCGCCTTCC
GGTGTGATTC CTCCCGCAGC CACGAGAGTT CCCGCCTCTT CATCGCTCCC AACACCTGCA
TCCACGAGTG TGCCGGGGAT CGTCGAGTCT GTTCCAGGCG AGGCAGAACC GCAACTTCCG
GCCACCGTCG TCGATTATCA GGGCGAGCAG GTGACGATTA CGTCCATCGA ACGGATCGTC
AGTCTGAACG GCGATGTGAC CGAAATCATT TTTGCGCTTG GGATGGGGGA TCATGTCGTC
GGCGTCGATA GCAGTGCCAC ATTTCCTCCC GAACGCACCA AAATGCTGCC AAACATCGGC
TATCAACGGC GATTGAGCGC CGAAGGAATC CTGGCGCTCA ATCCGACGCT GGTGATCGGC
GATGAGGCGG CCGGTCCGCC CGAAACGCTG GCGCAGATCC GCACCGCAGG CGTGCCGGTG
GCGATCACTG CCGATCCGCC AACGCTCGAT GCACCGGTGC AGAAAATTCG GTTTGTCGCG
CAGGCGCTCG GCATTCCGCA GCGCGGCGAA CGCCTTGCCG CGCAGGTCGA AGCCGAGATC
GCGCGCGCGC GCGACCTGGC GAGTCGAATA ACGAACCCGC CGCATGTCCT CTTTCTCTAT
CTGCGCGGCA CGGATGTTCA GCAGGTCGCC GGCAGTAAAA CGCCGGTCAA TGTGATGATC
ACTGCCGCCG GCGGACTCAA TGCAGGTGCG GAAGCCGGGA TTGTGGAGTT CAAACCGTTG
AGTCCCGAAG TGGTCATTGC TGCGCAACCC GATGTGATTC TAGTGCTGGA AAAAGGGCTG
GAGTCAGTTG GCGGCGTCGA TGGTCTGCTG ACCATCCCCG GTCTCGCTGA CACGCCGGCC
GGGAAACAGC GTCGGATCAT TGCATTCGAT GATCTCTACC TGCTCGGCAT GGGTCCGCGC
ACCGGCCAGG CGCTCGCCGA TCTCGCCATC GCATTGTATG AGACTTCATC ACAGGAGAAG
CATCCATGA
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| Protein sequence | MTSSHHERHA ASVGRLRRML LGFSLAVVAL LAACGTPSPS GVIPPAATRV PASSSLPTPA
STSVPGIVES VPGEAEPQLP ATVVDYQGEQ VTITSIERIV SLNGDVTEII FALGMGDHVV
GVDSSATFPP ERTKMLPNIG YQRRLSAEGI LALNPTLVIG DEAAGPPETL AQIRTAGVPV
AITADPPTLD APVQKIRFVA QALGIPQRGE RLAAQVEAEI ARARDLASRI TNPPHVLFLY
LRGTDVQQVA GSKTPVNVMI TAAGGLNAGA EAGIVEFKPL SPEVVIAAQP DVILVLEKGL
ESVGGVDGLL TIPGLADTPA GKQRRIIAFD DLYLLGMGPR TGQALADLAI ALYETSSQEK
HP
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