| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4359 |
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| Symbol | |
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| ID | 5541872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5614128 |
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| End bp | 5615093 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896465 |
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| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001434401 |
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| Protein GI | 156744272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TCATTTCGTT CAACGACGTG CTCTCTGCTC GCGACCGTCT GCACGGCATT
GCGCATACGA CGCCGGTGGC GACTTCGCGC ACGCTCGATG CGCGGACCAG ACGCGCTTTG
TTTCTCAAGT GCGAGAATCT GCAACGCGGC GGCGCGTTTA AGTTTCGTGG CGCCTACAAC
CTGATCAGCC GCCTGACGGA CGACGCGCGA CGGCGCGGCG TCGTCGCCTA TTCGTCAGGA
AACCATGCGC AGGGGGTCGC GCTCGCTGCA CGCCTGCTCG AAACGCCTGC CATTATTTGC
ATGCCATCCG ATGCGCCGGC AGTCAAGGTT GAAGCCACGC GCGGCTATGG CGCGGAGATC
GTGTTCTACG ACCGTATGCG CGACGACCGC GCGGCGCTGG CGCAGCGCAT CGCAACCGAA
CACGGCGCGA CCCTCGTGCC GCCCTACGAT CACCCGCATA TCATGGCAGG GCAGGGAACA
GCAGCGCTCG AACTGCTCGA ACAGGTCGAT GGCATTGACA CGCTGGTTGT ACCGGTTGGC
GGCGGCGGGC TGATCTCCGG GTGCGCCATC GCCGCTCACG GCGTGAACCC TGCCATCCAG
GTCATTGGCG TCGAACCTGA AGATGCCGAC GATACGCGCC GTTCCCTGGA GGCCGGCACA
CGCATCACTA TCCCGCCGCC AACAACGATT GCCGACGGTC TGCGCGTCAC GACTCCTGGT
GCGCTGACGT TCCCTATCGT GCAACGCCAT GTGGCGCAGA TTGTCACGGT GAGCGACGAT
GAGATCCGTG AAGCGATACG CTTTGTGATG CTGCGCATGA AACTGGTCGT CGAGCCGAGC
GGCGCAGCCG GGATTGCCGC CGCGCTTGCC GGTCGTCTAC CGGATTCAGC GCAGCGTGTC
GGGATCATCG TGTGCGGCGG CAATATCGAC CCGCCGTTGC TGGCGTCGTT GTGGGAAGAG
CGTTGA
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| Protein sequence | MTDIISFNDV LSARDRLHGI AHTTPVATSR TLDARTRRAL FLKCENLQRG GAFKFRGAYN
LISRLTDDAR RRGVVAYSSG NHAQGVALAA RLLETPAIIC MPSDAPAVKV EATRGYGAEI
VFYDRMRDDR AALAQRIATE HGATLVPPYD HPHIMAGQGT AALELLEQVD GIDTLVVPVG
GGGLISGCAI AAHGVNPAIQ VIGVEPEDAD DTRRSLEAGT RITIPPPTTI ADGLRVTTPG
ALTFPIVQRH VAQIVTVSDD EIREAIRFVM LRMKLVVEPS GAAGIAAALA GRLPDSAQRV
GIIVCGGNID PPLLASLWEE R
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