| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4343 |
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| Symbol | |
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| ID | 5541856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5594309 |
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| End bp | 5595979 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896449 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001434385 |
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| Protein GI | 156744256 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.236595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.180185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGACC GGTATGATCA ACAGTTGCGG CAGCTTGAGT CGCTGCTGCG CGTCAGTCGC
GCGATCACGG CGCAGCTCGA TCTCACCAGT GTGCTCAATC TGGTCATCGA GGCGGCGGTC
GATTTGCTTG CCGGCAGCTC CGGCTTGATT GCCCTGCGCG ATGATGATGG CACGACGCGC
ATTTATGCGG CGTATGGACT GGCGCGCGAA ATCTGGCCCG TGTTCGACGA CCTGCTGGCG
ACGCCGCTTA GCGATCAGCA GGCGCTGGTG CATCGCCTGC GCGAAGCAGG CGCCAGCATC
GGGCTGCCAT TACGGCATGT CAGCGCGTTA CCGCTGATGT TTCGCGGCGC GACGGTCGGG
GTGATCTATG TCTTTCGCGC TGCGCTGAAC GTCGAGTTTA CTGCCGAAGA ACATCAACTC
CTGACCGCAT TCGCCGATCA GGCGGCGATT GCGGTCTCGA ATGCACGCCT GTTCCAGAGC
GTCTTGCGTG AGAAACAACA TCTTGATGCG CTGATCGAGA ACAGCGCCGA CGGCGTGATG
ATCCTCGATG AGCGCTGGCG CATTGCCACA TTCAACCGTG CAATGGAACT GCTGACCGGT
TGGAGCCGTG AGGAGGCGAT CGGGCGCCCG TGCGCCGAGG TGCTGGCTAT CCACACGCCG
CAAGGCGCCA ATCTCTGCCT TACCGATTGC CCGTTGCAAC GGCAACCGTT CGAGCCTAAT
CCGGTCGCCG AGGGGTGGAT CACCACACGG GACGGACGGC GTCTCTACAT CCAGAGTCGC
TACGCAGCAC AACGCAGCCC GCAGGGCGCG TTTCTTGGCG CCATCGCCAA CGTGCGTGAT
GTCACCGAGC AGAAGATCGA AGCTGAGATG CAGAACACCT TCATTTCAGT CATCTCGCAC
GAATTGCGCA CACCGGTCAG CATTATTAAA GGATACGCCG AGACGCTGGC GCGCCAGGAT
GCGGCATGGG ACGCAGCGAC TCTCCGTGAA GGACTGGCCG TTATCATCGA AGAGGCGGAT
CGCCTGGCGC AGCAGATCAA CACGCTGCTG GAAGCCTCCC GTTTACAGAC CGACAGTATG
CGCCTCGAGT TGAGCGACTG GTCGGTACGC CCTCTGGTGG AGCGCGTGGT CGAACGCTTC
GCACCACAGG CAGGCGACCG GTTCACGTTC CAGATCGACA TTCCCGACGA CTTTCCGCCA
GTCCATGCCG ATTATGAGCG GACCCGCACC GTGGTGGAGA ATCTGATCAG CAACGCGATT
AAGTACAGCC CGAACGGTGG GTTGATACGC ATCACGGCGC GGGTGAGCGG CGATTTTGCG
ATTATCTCGG TGAGCGATCA GGGTATTGGC ATACCGCTCG AAGAGCAGAA AAAACTCTTT
CGCCGCTTCT ATCGCGTCGA TAACCGCCTG CGGCGTGAAA CGCAAGGAGC AGGATTGGGG
TTGTTCCTGT CGCGCGTTAT TGTTGAAGCG CAGGGTGGGC GAATCTGGGT CGATAGCCGA
CCGGGGCGCG GGTCGCGCTT TTCGTTTACT GTGCCGCTGG CAACGCCAAT GCTGAGCGAT
CAGATGGCGT CGGGTGAGAT CGAAACTGCC ACATCTGTCG ATCATCCTGA GTCAACCGTA
GTAACGCTTC CACGGATGGA ACCGCCGCTG CTCGAGGATC ATGAACGTTA A
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| Protein sequence | MLDRYDQQLR QLESLLRVSR AITAQLDLTS VLNLVIEAAV DLLAGSSGLI ALRDDDGTTR
IYAAYGLARE IWPVFDDLLA TPLSDQQALV HRLREAGASI GLPLRHVSAL PLMFRGATVG
VIYVFRAALN VEFTAEEHQL LTAFADQAAI AVSNARLFQS VLREKQHLDA LIENSADGVM
ILDERWRIAT FNRAMELLTG WSREEAIGRP CAEVLAIHTP QGANLCLTDC PLQRQPFEPN
PVAEGWITTR DGRRLYIQSR YAAQRSPQGA FLGAIANVRD VTEQKIEAEM QNTFISVISH
ELRTPVSIIK GYAETLARQD AAWDAATLRE GLAVIIEEAD RLAQQINTLL EASRLQTDSM
RLELSDWSVR PLVERVVERF APQAGDRFTF QIDIPDDFPP VHADYERTRT VVENLISNAI
KYSPNGGLIR ITARVSGDFA IISVSDQGIG IPLEEQKKLF RRFYRVDNRL RRETQGAGLG
LFLSRVIVEA QGGRIWVDSR PGRGSRFSFT VPLATPMLSD QMASGEIETA TSVDHPESTV
VTLPRMEPPL LEDHER
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