| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4328 |
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| Symbol | |
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| ID | 5541841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5580887 |
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| End bp | 5582179 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896434 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001434370 |
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| Protein GI | 156744241 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACGA TTGATCGCTC ACAGGCTTCC TGGAAATATC CTTTTGCGCT GATCTGGATT
GGTCAGGCGT TCTCACTCTT CGGCAGCGGG CTGGCTGGCT TTGCTATCGT CTGGTGGCTG
ACGGCCACTA CCGGCTCTGC CACGGTCCTT GCGACCGCAA CACTCGCCAC GCTTTTGCCG
GGCATTCTGA TCGGACCGCT CGCCGGAGCG CTGATCGACC GCTGGGATCG ACGCGCAGTC
ATTATGGTCG CCGATCTGAC CGGCGCGCTT GGAGCGGCTG CGCTCGCCGT CCTGTTCTGG
ATCGACGCAC TCGCCATCTG GCATGTCTAC CTGATTATGG CGTTGCGGTC GCTGGCGGGC
GCGTTCCATT GGCCCGCAAT GCAGGCATCG ATATCGCTCA TGGCGCCCGA ACGCCATCTG
GCGCGCATTG GCGGACTGAG TCAGATGCTT CAGGGGGCAA CCAATATTGC TGCACCGCCG
CTTGGAGCGT TGCTGATTGC GATCTGGCCC CTGCATGGTC TGATGTTGAT TGATGTTGTG
ACGGCGCTCA TCGCAGTGGC AGGCGTCGGT CTGGTGCGTT TCCCGCGCCC GCCGCGAGCC
GCGCCTGCTG TCGCTGATGC GCCTGCAACC GGTGTTGTGG CGGAGATGCG CGCCGGACTA
CGGTATATCT CTCGCTGGCC CGGATTGATG ATGGTCATGG GCATGGCGGC ATTGATCAAT
CTGCTCCTGA CTCCGGCGTT CTCGCTGTTG CCGATCCTGG TAACCAGGCA CTTTCATGGC
GAGGCGCTCC ATCTTGCCTG GATGAACGCT GCCGAAGGCG CAGGCATCGT TCTTGGCGGA
CTGATCATCG GCGTATGGGG CGGATTCAGG CGTCGTATGA ATACTGTTGT GTTTGGGCTG
ATTGGGTTAG GCATCAGCAT TCTGGCAATC GGCGCTGCAC CGGCAACCGC TTTCTTGCCT
GCACTCGCCG CAGTAGCAGT GGTCGGCGCT ATGTCGCCGG TGGTCAATGC CCCAATGATG
GCAATTGTGC AGTCAGTCGT GGCGCCAGAA ATGCAAGGGC GTGTCTTCAC GGCATTGGGG
AGTGTGTCGA TGGCAATGAC CCCGCTGGGG CTGGTGATTG CCGGTCCGGT CGCTGATGCG
TTTGGGGTGC AGGTCTGGTA TCTGCTTGGC GGCTGCGCCT GCCTGCTTAT GACCCTTCTG
GTTCTTGGCA TTCCCGCCGT GCGCGATCTG GAGGATCGTC CGCGCGACAG CGGGAGAAGT
GCGGTGGTCA GATCAGAGAA TGTTCCATCT TGA
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| Protein sequence | MFTIDRSQAS WKYPFALIWI GQAFSLFGSG LAGFAIVWWL TATTGSATVL ATATLATLLP
GILIGPLAGA LIDRWDRRAV IMVADLTGAL GAAALAVLFW IDALAIWHVY LIMALRSLAG
AFHWPAMQAS ISLMAPERHL ARIGGLSQML QGATNIAAPP LGALLIAIWP LHGLMLIDVV
TALIAVAGVG LVRFPRPPRA APAVADAPAT GVVAEMRAGL RYISRWPGLM MVMGMAALIN
LLLTPAFSLL PILVTRHFHG EALHLAWMNA AEGAGIVLGG LIIGVWGGFR RRMNTVVFGL
IGLGISILAI GAAPATAFLP ALAAVAVVGA MSPVVNAPMM AIVQSVVAPE MQGRVFTALG
SVSMAMTPLG LVIAGPVADA FGVQVWYLLG GCACLLMTLL VLGIPAVRDL EDRPRDSGRS
AVVRSENVPS
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