Gene Rcas_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4279 
Symbol 
ID5541790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5521528 
End bp5521893 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID640896386 
Producthypothetical protein 
Protein accessionYP_001434324 
Protein GI156744195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000892613 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0290084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG TGCGCAAGCT GACCAAAGAG GAAGCGTTCC TCCTCGAAAA CAGAGGCAAA 
GGTATGCGAA CATTGATTGC CGCAGAGTAC GACCACTTTC TGGAGGATTA TGAGATTGGA
GATTACGGCG AAGTAGAACT TGAACCGGAC GACAAGCGCA CGACTGTGCG CAGCCGTCTC
CGTGCGGCGG CAAAACGACG TGGTTTCGAC ATCCTCTTCT TTCGCACGCG AGGAAGTATC
ATTCCGTTCA AGATTGTCCA GCTGCGACCT GAAATGGAAC TCCATCCCGC TCCCGTCTCG
TCGAACTCAG CAGAGGGCGC GCCACAGCGC CGAAGACCGG GACGACCGCG CAAACAACCA
GCATAA
 
Protein sequence
MPKVRKLTKE EAFLLENRGK GMRTLIAAEY DHFLEDYEIG DYGEVELEPD DKRTTVRSRL 
RAAAKRRGFD ILFFRTRGSI IPFKIVQLRP EMELHPAPVS SNSAEGAPQR RRPGRPRKQP
A