Gene Rcas_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4262 
Symbol 
ID5541773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5502508 
End bp5503695 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID640896369 
Productaminotransferase class V 
Protein accessionYP_001434307 
Protein GI156744178 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.907816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAC GATTGATCTA TCTCGACCAC GCAGCGACGA CGCCGGTCGA TCCGGCGGCG 
CTTGCGGTGA TGCTCCCGTA CTTCACCACG CATTTTGGCA ATCCTTCGAG CATCTACCGC
GTCGGGCGCG CTGCGTTGCA CGCGCTCGAT GAAGCGCGCG ATCAAGTGGC GGCAATCCTG
GGTGCATCGC CGCGTGAAAT TATCTTTACC GGCAGTGGTT CCGAGAGCGA CAACCTGGCG
ATCCGCGGCG TCGCGCTGGC GCAGCGTCAG GCGGGGCGCG GCGCGCATCT CATTACCAGT
GCGATTGAGC ATCATGCGGT GCTCCATACG GTCGAACACT TGCAGGCGTT TGGGTTTGAG
GCGACCATTT TGCCGGTTGA TAGCAGCGGT CTGGTGCAGC CCGACGATCT GCGCGCGGCG
CTACGCCCGG ATACGGTGCT GGTGTCGGTT ATGTATGCCA ATAACGAGAT CGGCACGATT
CAGCCGATTG CTGAACTGGG CGCGATTTGC CGCGAGCGCG GCGTTCCTTT CCATACCGAT
GCGGTGCAGG CGCCTGGCGC CTTGCCGCTC GATGTGCGCG CGCTCAATGT CGATCTGATG
ACGATTGCCG CACACAAGTT CTACGGTCCC AAGGGGGTCG GTGCACTGTA CGTCCGCCGG
GGAACGCCGC TGCTGCCGCA GATCACCGGC GGCGGGCAGG AGCGACGGCG GCGGGCAGGC
ACCGAGAATG TGCCCGGCAT TGTCGGTATG GCAGCGGCGT TGCGTCTTGC TGAGGAGCGC
CGCGCCGCCG ACAGCGCTCA CTGCGCACGC CTGCGCGATC GATTGGTGAA CGGTGTTCTG
GAACGGGTTC CAGGCGCGCG CCTCAACGGG CATCCGACAC GCCGCCTACC GAACAATGCC
AATCTGTCGT TCGAGGGAGT GGAGGGCGAG AGTATCCTGC TCCTGCTCGA TCAGCACGGC
ATCGCGGCAT CGAGCGGGTC TGCCTGCACC AGCGGCTCAC TGGAGCCGTC GCATGTGCTG
CTGGCGCTGG CTCGCGCAGC CGGATCGGAC ACGACGGCGG AAGTCGCGTC GGCGCTCCCC
GGCGCGGTGC GCTTCACCTT TGGACGTGAC AATACCGACG CAGATGTGGA CGTGGTGCTT
GACGTTCTGC CCGGCATTAT CGCCCGGCTG CGGGAGATGG CGGGGTAG
 
Protein sequence
MTERLIYLDH AATTPVDPAA LAVMLPYFTT HFGNPSSIYR VGRAALHALD EARDQVAAIL 
GASPREIIFT GSGSESDNLA IRGVALAQRQ AGRGAHLITS AIEHHAVLHT VEHLQAFGFE
ATILPVDSSG LVQPDDLRAA LRPDTVLVSV MYANNEIGTI QPIAELGAIC RERGVPFHTD
AVQAPGALPL DVRALNVDLM TIAAHKFYGP KGVGALYVRR GTPLLPQITG GGQERRRRAG
TENVPGIVGM AAALRLAEER RAADSAHCAR LRDRLVNGVL ERVPGARLNG HPTRRLPNNA
NLSFEGVEGE SILLLLDQHG IAASSGSACT SGSLEPSHVL LALARAAGSD TTAEVASALP
GAVRFTFGRD NTDADVDVVL DVLPGIIARL REMAG