Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4262 |
Symbol | |
ID | 5541773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5502508 |
End bp | 5503695 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640896369 |
Product | aminotransferase class V |
Protein accession | YP_001434307 |
Protein GI | 156744178 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.907816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAC GATTGATCTA TCTCGACCAC GCAGCGACGA CGCCGGTCGA TCCGGCGGCG CTTGCGGTGA TGCTCCCGTA CTTCACCACG CATTTTGGCA ATCCTTCGAG CATCTACCGC GTCGGGCGCG CTGCGTTGCA CGCGCTCGAT GAAGCGCGCG ATCAAGTGGC GGCAATCCTG GGTGCATCGC CGCGTGAAAT TATCTTTACC GGCAGTGGTT CCGAGAGCGA CAACCTGGCG ATCCGCGGCG TCGCGCTGGC GCAGCGTCAG GCGGGGCGCG GCGCGCATCT CATTACCAGT GCGATTGAGC ATCATGCGGT GCTCCATACG GTCGAACACT TGCAGGCGTT TGGGTTTGAG GCGACCATTT TGCCGGTTGA TAGCAGCGGT CTGGTGCAGC CCGACGATCT GCGCGCGGCG CTACGCCCGG ATACGGTGCT GGTGTCGGTT ATGTATGCCA ATAACGAGAT CGGCACGATT CAGCCGATTG CTGAACTGGG CGCGATTTGC CGCGAGCGCG GCGTTCCTTT CCATACCGAT GCGGTGCAGG CGCCTGGCGC CTTGCCGCTC GATGTGCGCG CGCTCAATGT CGATCTGATG ACGATTGCCG CACACAAGTT CTACGGTCCC AAGGGGGTCG GTGCACTGTA CGTCCGCCGG GGAACGCCGC TGCTGCCGCA GATCACCGGC GGCGGGCAGG AGCGACGGCG GCGGGCAGGC ACCGAGAATG TGCCCGGCAT TGTCGGTATG GCAGCGGCGT TGCGTCTTGC TGAGGAGCGC CGCGCCGCCG ACAGCGCTCA CTGCGCACGC CTGCGCGATC GATTGGTGAA CGGTGTTCTG GAACGGGTTC CAGGCGCGCG CCTCAACGGG CATCCGACAC GCCGCCTACC GAACAATGCC AATCTGTCGT TCGAGGGAGT GGAGGGCGAG AGTATCCTGC TCCTGCTCGA TCAGCACGGC ATCGCGGCAT CGAGCGGGTC TGCCTGCACC AGCGGCTCAC TGGAGCCGTC GCATGTGCTG CTGGCGCTGG CTCGCGCAGC CGGATCGGAC ACGACGGCGG AAGTCGCGTC GGCGCTCCCC GGCGCGGTGC GCTTCACCTT TGGACGTGAC AATACCGACG CAGATGTGGA CGTGGTGCTT GACGTTCTGC CCGGCATTAT CGCCCGGCTG CGGGAGATGG CGGGGTAG
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Protein sequence | MTERLIYLDH AATTPVDPAA LAVMLPYFTT HFGNPSSIYR VGRAALHALD EARDQVAAIL GASPREIIFT GSGSESDNLA IRGVALAQRQ AGRGAHLITS AIEHHAVLHT VEHLQAFGFE ATILPVDSSG LVQPDDLRAA LRPDTVLVSV MYANNEIGTI QPIAELGAIC RERGVPFHTD AVQAPGALPL DVRALNVDLM TIAAHKFYGP KGVGALYVRR GTPLLPQITG GGQERRRRAG TENVPGIVGM AAALRLAEER RAADSAHCAR LRDRLVNGVL ERVPGARLNG HPTRRLPNNA NLSFEGVEGE SILLLLDQHG IAASSGSACT SGSLEPSHVL LALARAAGSD TTAEVASALP GAVRFTFGRD NTDADVDVVL DVLPGIIARL REMAG
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