| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4216 |
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| Symbol | |
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| ID | 5541727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5453613 |
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| End bp | 5455073 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896323 |
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| Product | isochorismate synthase |
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| Protein accession | YP_001434261 |
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| Protein GI | 156744132 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.192209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.410479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC CCTTCCAACA ACACTATGGT CGCCTGATCA GCCTGAGCAT GCCGTGCCCT
GGCGTGTCTC CCGCCGATCT GTTGCGCCAT GCGCGCGGGC AGCCGCGATC ATTCTGGGAG
AGCGCCCGCG ATGGGGTGGC GTTCGCCGGG ATGGGGATCG CGGTCGAACT GATGGCGTGG
GGCGCCAATC GTTTTGTCGA AATCGAGCAG CAGGCGCGCG CGCTGTTCGA GAACGCCGTC
ATGCTCGATG AGCGTGAGCC GCTGGCGGCG CCACGTCTCT TTGGCGGCTT TGCGTTCCAC
AACGATTTCG TGCCCGATCT GGCATGGGCT GATTTCCCGC CAGCACATTT TGTGCTGCCA
CACTACCAAC TGGTGCGCGT TCGCGATTCG TTCTGGTTGA CGCTGAACGT CCACGCGCCA
CCTGGCGAGG ACCCGCGCGC GCTAGCGCCC GACTTGCGCG AGGCGCTGCT GGCGCAGGTC
GATGCGCTTC AGAGCGAGCC GCCGCCACTG CCGCCGCGTT CGTCGGCGCG CCTTGCATAT
CCCATGCCGT TCGAGCAGTG GGCGCGCAGT GTGGAACGGA TTGTCCGGCA GATCAACGTC
GGTGAATTGA AGAAGGTCGT GCTGGCGCGG ATTGCCGAGG CATCGTTCGA CGCGCCGGTG
GATGTCGATA GCGCCCTGGC GTGTCTGGCA CAGCGCTACC CCGACACGTA TCGCTTTCTC
TTTGAGCCGC GTCCGGGGCG CGCATTCTTC GGCGCAACGC CGGAATTGCT GGCGCAGGTG
AACGGCGACC GGGTGACGAC AATGGCGCTG GCAGGCAGCA TCCGGCGTGG CGCAACACCC
GATGAAGATG AGCGTCTTGC TTTGGCGCTG CTCGATAGCG CAAAGGATCG CCACGAGCAT
CAGATTGTGG TCGATGAGGT GCGCAATCGT CTGGCGTCGC TGACCAGGCG CCTGGATGTG
GGAGCAACTG ATGTGATGCG GTTGAGCAAT ATTCAGCACC TGCACACGCC AATCAGTGGC
GTACTGCGCG AGCCACGCGG CATTCTGCCG ATCATTGCGA CGCTCCACCC AACGCCTGCG
CTCGGCGGTG AGCCGCGCGC GGCGGCGATG CGCCTGATCG CCGAACTGGA ACCGGCGCCG
CGTGGCTGGT ATGCTGCGCC CGTCGGCTGG ATCGACCGGC GCCTGGATGG GCAGTTCGGG
GTTGCCATTC GCTCGGCAGT GGTACAGGCG ACCCGCGCCT GGTTGTACGC CGGCGCCGGT
ATCGTTGCCG CAAGCGATCC GCAACGCGAG TGGGACGAAA CGAACCTTAA GTTCCGTCCG
ATGCTCGAGG GGTTGGGGCA CACGGATCGC CACGGGTTGG GGCACCTGGT AGGGACACGG
ATCGCCACGG ATACGACGGA TCGCCACGGG TTGGGGCACA CGGATCGCCA CGGATACGAC
GGATCGCCAC AGATTAAGTA A
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| Protein sequence | MTKPFQQHYG RLISLSMPCP GVSPADLLRH ARGQPRSFWE SARDGVAFAG MGIAVELMAW
GANRFVEIEQ QARALFENAV MLDEREPLAA PRLFGGFAFH NDFVPDLAWA DFPPAHFVLP
HYQLVRVRDS FWLTLNVHAP PGEDPRALAP DLREALLAQV DALQSEPPPL PPRSSARLAY
PMPFEQWARS VERIVRQINV GELKKVVLAR IAEASFDAPV DVDSALACLA QRYPDTYRFL
FEPRPGRAFF GATPELLAQV NGDRVTTMAL AGSIRRGATP DEDERLALAL LDSAKDRHEH
QIVVDEVRNR LASLTRRLDV GATDVMRLSN IQHLHTPISG VLREPRGILP IIATLHPTPA
LGGEPRAAAM RLIAELEPAP RGWYAAPVGW IDRRLDGQFG VAIRSAVVQA TRAWLYAGAG
IVAASDPQRE WDETNLKFRP MLEGLGHTDR HGLGHLVGTR IATDTTDRHG LGHTDRHGYD
GSPQIK
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