| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4186 |
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| Symbol | |
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| ID | 5541697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5415292 |
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| End bp | 5416359 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896296 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001434234 |
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| Protein GI | 156744105 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.302621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000330857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCAATG TCGTCGCAAC CCGCGTTCTG GTCGTCGATC CGTCTGCTCC CGATCCGCGG
ATCATCGCTG AAGCCGCTGC GGTGATCGAG TCAGGCGGGT TGGTGGCGTT TCCCACCGAA
ACGGTCTATG GTTTGGGCGC CAATGCGCTC GATGAGCGGG CGGTGACGCG CATTTTTCGC
GCCAAGGGGC GCCCGGCAAC CGACCCGATC ATTGCGCACA TCGCCGATCT CCGGCAACTC
GACATGCTTG CGCGCGACAT ACCGCCGGTT GCGCGTGTGC TGGCACAGCG TTTCTGGCCC
GGACCACTCA CACTTGTGGT GTGGCGGCGT CCTATCGTAC CTGCCAATCT CTCCGCCGGG
CGCGCCACGG TTGCTGTGCG TATGCCGGCT CACCCGGTGG CGCTGGCGTT GATCGCTGCC
GCTGGCGTAC CGATTGCAGC GCCGAGCGCC AACCGCTTCA GTCGCCCAAG TCCGACGACG
GCGGTGCATG TGCTCGATGA CCTGGCAGGG TGCATTGATC TGGTGCTCGA TGGCGGTCCC
ACGCTGGTCG GCATTGAGTC GAGCGTGGTC GATCTGACCA CCGATCCCCC CAGGCTGCTG
CGCCCTGGCG GGGTGACGGT TGCGGCGCTG CGGGAACTGT TGCCTGAATT GATCGTTGAG
CCGCGCTATC TGTCTGTTGG CGACGAAGCG GCGCCGGCGC CGGGGATGTT GCTGCGGCAC
TACGCTCCCG ATGCCCCATT GATCGTGGTG GCGGGTGAGC GTGAAGCAGC ACTGGCGCGC
ATTCGCAGCG AGGTGCTGAT GGCTCTTGAT GCAGGAAAGC AGGTTGGTAT GCTGGCGTTC
GACGAAGACG TGGCGGAGCT GGCTGATCTC CCGGTGCGGA TTGTAGCGCT TGGTTCTGCG
GCCAATCCCG GGCAGGTGGC GCAACGCCTG TTTGCAGCAT TGCGCGAAAT CGAACGTATC
GGCGTCGATC TGATCCTGGT GCGCGATCCC GGTCGGGAAG GATTGCGCCT CGCCGTTCGC
GACCGCCTGG TGCGCGCCGC CGAAGGGCGA GTTATTAACG CCGAATGA
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| Protein sequence | MSNVVATRVL VVDPSAPDPR IIAEAAAVIE SGGLVAFPTE TVYGLGANAL DERAVTRIFR
AKGRPATDPI IAHIADLRQL DMLARDIPPV ARVLAQRFWP GPLTLVVWRR PIVPANLSAG
RATVAVRMPA HPVALALIAA AGVPIAAPSA NRFSRPSPTT AVHVLDDLAG CIDLVLDGGP
TLVGIESSVV DLTTDPPRLL RPGGVTVAAL RELLPELIVE PRYLSVGDEA APAPGMLLRH
YAPDAPLIVV AGEREAALAR IRSEVLMALD AGKQVGMLAF DEDVAELADL PVRIVALGSA
ANPGQVAQRL FAALREIERI GVDLILVRDP GREGLRLAVR DRLVRAAEGR VINAE
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