| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4177 |
|---|
| Symbol | |
|---|
| ID | 5541688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 5407934 |
|---|
| End bp | 5408581 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640896288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001434226 |
|---|
| Protein GI | 156744097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000111276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000183322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGATCACCG CGGAGATTCC CATGTCTTAT CACATCCCTA TTCGGCGCAA AATGCCTCGT
GATGGTTCAG ATCATAGCAT CGCCTCTTCC CTAAAGATAA TCCATGGCGC GGACGATCAA
TCAGGCGAAC ACCTGTTAGA TACTCCGACG CAAACGCTGC CGGCATTCAA CGACCGGCTT
CCCGGTCACA CGTTTCACCA GATTCGCATT CATGCCGGGC ACAACGCCCC AGAGAGCGGT
TCGGCGCCTG GTGCTGCGCC GCCCGCTTTC AGGGCGCCCC CCATTACTCC CGTTCAGGCG
CCAGGTCTGG CGCGTTCCCT CGCCACACCG GTTCGGACGA GCAGTGTGAC TCCGATGGTG
CAACGGAAGC CTCCCGTCGG CACAGCGCAA TCGATTGCAA ATGGGCACGC CTTTACCAAG
CACGTCCAGA CGCAGCGAGA GTTCCCGGAA ATCTCAAGTG TCGGCGATTT CGCCACGCTG
ATCGAGACTA TCATTAACAG TCCCGCCGAA CACAAAGTCT TGAGCAACGG TCGCGAGGCA
TTTTGGGATG GCAAAGACAC TGTCGTCATT TATAATCCCA AGGCTGGCGA CAAAGGCACC
TGTTTCAGAC CCACCGCCGG CAAGAGGTAT TTCGACAATC TCGCATAG
|
|---|
| Protein sequence | MITAEIPMSY HIPIRRKMPR DGSDHSIASS LKIIHGADDQ SGEHLLDTPT QTLPAFNDRL
PGHTFHQIRI HAGHNAPESG SAPGAAPPAF RAPPITPVQA PGLARSLATP VRTSSVTPMV
QRKPPVGTAQ SIANGHAFTK HVQTQREFPE ISSVGDFATL IETIINSPAE HKVLSNGREA
FWDGKDTVVI YNPKAGDKGT CFRPTAGKRY FDNLA
|
|---|
| |