| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4170 |
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| Symbol | |
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| ID | 5541681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5396332 |
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| End bp | 5399847 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896281 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001434219 |
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| Protein GI | 156744090 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00460578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0104573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC AACGACGTGA AGAGAAACTC AACGGTATGC CCATTTCGGA CACCTCAATT
CGTCAACCGG TATTCGTAAC GATGCTCATG CTGTTGACGG TGGTGTTTGG CATTCTGGCA
TTCCGCTCGC TGCCGGTCAA TCTGCTTCCC GACTTTGAAG TGCCGATCAT CGCAGTGAGC
GTCCCCTACC CCGGCGCCGG TCCAGAGAGT GTGGCCGATC AGGTTGCCAA ACCAATCGAA
GATGCAGTCA ACACAATCGA GGGCATCGAG AACATCACCA CGAACGCCAG CGAAGGTCTG
GCAGTCATCA TTCTTGAGTT CGCTCAGGGC ACCGATGTCA ATCGCGCCGA TCAGGACGTG
CGCGAAAAAG TGAATGCCAT TCGCCCGACG TTGCCGCGCG ATGTGCGTGA GCCAATCTTC
CAGAAGTTCG ATCCGAACGC TGCGCCGATT GTCTCCTTCG CTATTGCCGG AACGCAGAAC
CAATCGCCGC TCGAAGTGCG TCGGATTGTC GATACCGAGA TTTCGCCGCT GCTTCAACGC
GCACAAGGCG TCGGCTCCGT GCAGATCTCC GGCGGTCTGC AACGCCAGAT CAATGTGCTG
ATGGACCTCG AGAAACTGCG CGCCTACGGC ATTTTGCCGG CACAGATCAC GCGCGCGTTG
CAGCAGGCGA ATGTGAACCT CGGTCTTGGC TCGATTACCG CCGGTTCGCA GGAGATCAAC
CTGCGCGCGC CGTCGCTGCT GCACACTCCT GAAGATATTG CGAACATCCA GATTACCGGA
ACCTCGTACC GCATCGGTGA TGTGGCGACT ATTGAGGATG GCGTCGCCGA GAAGCGCAGT
TACACCCGTC TCAACGGCGT CGAAGCGATC ATCATCGATG TGCGCAAGCA GAGCGGCGCC
AATACCGTTG CGGTCGCTGA TAATGCGAAA GCTGCGATAG AACGCGCGCT CGCCAACCGT
AGTGATCTGA CCTACATTAT TCCGCGCGAT TCGTCGGAAG CGGTGCGCCA GTCGACGATC
AGTTCGCTTG AAGAGCTGAT CTATGCCTCG GTCGCGGCGC TCATGGTGGT GATGATGTTC
TTCAGTGGCG TGCGCAATAT GCTCGTCACT GCTGCGGCGC CCGCCGCTAT TGCGCTGGTC
GGTCTTGGCA TCCTCCCCGC CGTTGGCATT CCGGTCGATA AGGTGCTCGT GCTGGCGGCA
GCGATCGGCT TGCTGGTGGT GCTGACCTTC ATCCGCGACC GCAATACGCT CGTGACAATG
GCGGGTCTGC CGATCATTCT AATGGGCACT TTCGCGCTCA TGCCGGTGTT TGGGTTGTCG
ATCAACCTCA TTACCCTGCT GGCGCTGGCG CTCTGTGTCG GTCTGGTGAT CGACGACGCC
ATTGTGGTGC GCGAGAACAT CTTCCGCCAC ACGCAGCGCG GCGAGACGCC GCGTGTTGCT
GCCAGCAAGG GCACGGCGGA AGTGGCGCTC TCGGTGGTGG CGATGACCCT GACGGTCGTG
GCGGTGTTTG TGCCGGTGAC GTTTACGAGC GGCACAACCG GCATTATCTT CAAGTCGTTC
GGTATTACCA TCGCGGTTGC CATTCTTCTT TCGCTGGTGG AAGCGTTCAT GTTTGCGCCG
ATGCTCTCTG CCAATCTGTT CCGCCGTCAG AAGGTGCAGC CGCATCTGCA CGATGAGGCG
CATTCGCACA CCGGCGATGT CGGGCGCGCG GCGCGGCGCT TGCGCAATAT CGATCCCAAC
CAGGCGGATG CCAGCCTGCT TCACGAGGCG GAAGAAGATC CAGGTCCGCT TGGTCGGTTC
TACGAACGCA CCCTTTCCTG GAGTCTGCGC AGCCTGCGTA ATCGCCTGAT CGTCATTGCG
ACGGCAGTGG TGGTGTTGGT CTTGAGCGTG ATTGTCGCCA GCGGTTTGAA GTTCAGTTTC
TTCCCGCAGC AGGATGCCGG AGAGTTCCTG ATCGGCTTTG AACTGCCGCC GGGCACGGCG
CTGGCAGAGA CTGATCGCCT TGCGCGTCAG GCGGAACAGG TGCTGTTGGT TGACCCGGAC
GTTAAGTCGG TGATCAGTAC CGTCGGCTTT TCTGGCGCTC CAGAGCGCGC CGAGTTCTTC
GTGCGCCTGA AGGACGACGT GCCGACTCGT TCGGTCGAGG AGCGACTGCG TCCACAACTG
ACATTCCTGC CGAACCTGAC ATTCGGCTTA CCATCGATTG GTGCGCCGAC CTCAACCGGC
GTCACCGGTC GCCAGTTGCA GTTGAGCCTG CAAACCACCG AGCCGGTGCA GAACCTGGCG
CCGGTCATTG AGCAGATCAA GGCGGAGATG GCAGCCATTC CCGGCGTGGT GGACATTGAC
ACCAACTATC GCCCCGGCAA GCCGGAACTG CGCTTCATCG CCGACCCGGA GCGCATCGGC
GACCTGGGGA TCACCAGTGA TGAGATTGCA TCGTCGGTGC GCGCCTTGGT GAACGGCGAC
CGCGCGACGG TGCTGCGTCA GGCGGGGCAA GATGTCGAAA TCATCGTGCG TCTGCGCCCT
GAAGATCGCG CCACGCCGGA AGCGTTGCAG AACATTGCTA TTCCGACCCG TAGTGGCACG
GTTCCGCTGA GCGCGCTTGG GCGGATTGAA CTTGCGTCGA CGCCGCAGAC GATCCGGCGC
TACGATAAAC TCAATCAGGT GATCATCGGC GCGAACCTGC AAGGGCGCAA CCTCGGCGAA
GTGCAGAGCG AACTGCAACA GCGCCTGGAG GCGAAGGGGA TCATTCCGCC GACGGTAATC
GCCAGTTTCA CGGGCCTGGT GCAGCAGCAG ACCGAAGGGT TCGAGTCGTT GCTCCTGGCG
ATGCTGCTGT CGGTCATCTT CGTCTACATG GTTCTGGCGT CGCAGTTTGG ATCGTTCACG
CAACCACTGG TGATCATGGT GGCGATGCCT TTCAGTTTCA TCGGCGCATT TCTGGCATTG
CGTCTGATCA ATATCGACCT CGACATCACC GGCATGATCG GGTTGATCAT GCTCCTCGGT
CTGGTGGTGA AAAACTCGAT CCTGCTGGTG GACTTCACCA ACCGCCTGCG GCGCGCCGGT
CTCGATAAGC ATGCCGCGCT CGAACTTGCG GGGGCCATCC GTCTCCGCCC GATTCTGATG
ACCACCCTGT CGCTGGTGGC AGGCGCGTTG CCGGTGGCGA TGGGTATTCA CCTGGTCGGC
ACCGGCGAAG GCGGCGAGTT CCGTAAAGGG CTGGCAACCG TGCTGATCGG CGGGTTGACG
ACTTCGATGC TTCTGACGCT GCTCGTGGTG CCGACCGCCT ACAGTCTGAT GGAGTCGTTC
ACCGAGCGCG TTTCGAACTG GTTCCGCCGT CGCTTCGACC CGGAGGGGTG GGCGGAAGAG
CAGGCTGCTC TGGCAGCAGA GCGCATGGCC CCGGTTAATG GTGCAGCGGC GCCCTCTGCT
CCCTATGGGG GAACTGCCGC CGCGCTGCCG ATAACGGCGG GTGAGCCGAA TGGCTACGAA
CCGGTGAGTG CGCCGCCGGC CCGCGCTGAG GGATAA
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| Protein sequence | MAIQRREEKL NGMPISDTSI RQPVFVTMLM LLTVVFGILA FRSLPVNLLP DFEVPIIAVS
VPYPGAGPES VADQVAKPIE DAVNTIEGIE NITTNASEGL AVIILEFAQG TDVNRADQDV
REKVNAIRPT LPRDVREPIF QKFDPNAAPI VSFAIAGTQN QSPLEVRRIV DTEISPLLQR
AQGVGSVQIS GGLQRQINVL MDLEKLRAYG ILPAQITRAL QQANVNLGLG SITAGSQEIN
LRAPSLLHTP EDIANIQITG TSYRIGDVAT IEDGVAEKRS YTRLNGVEAI IIDVRKQSGA
NTVAVADNAK AAIERALANR SDLTYIIPRD SSEAVRQSTI SSLEELIYAS VAALMVVMMF
FSGVRNMLVT AAAPAAIALV GLGILPAVGI PVDKVLVLAA AIGLLVVLTF IRDRNTLVTM
AGLPIILMGT FALMPVFGLS INLITLLALA LCVGLVIDDA IVVRENIFRH TQRGETPRVA
ASKGTAEVAL SVVAMTLTVV AVFVPVTFTS GTTGIIFKSF GITIAVAILL SLVEAFMFAP
MLSANLFRRQ KVQPHLHDEA HSHTGDVGRA ARRLRNIDPN QADASLLHEA EEDPGPLGRF
YERTLSWSLR SLRNRLIVIA TAVVVLVLSV IVASGLKFSF FPQQDAGEFL IGFELPPGTA
LAETDRLARQ AEQVLLVDPD VKSVISTVGF SGAPERAEFF VRLKDDVPTR SVEERLRPQL
TFLPNLTFGL PSIGAPTSTG VTGRQLQLSL QTTEPVQNLA PVIEQIKAEM AAIPGVVDID
TNYRPGKPEL RFIADPERIG DLGITSDEIA SSVRALVNGD RATVLRQAGQ DVEIIVRLRP
EDRATPEALQ NIAIPTRSGT VPLSALGRIE LASTPQTIRR YDKLNQVIIG ANLQGRNLGE
VQSELQQRLE AKGIIPPTVI ASFTGLVQQQ TEGFESLLLA MLLSVIFVYM VLASQFGSFT
QPLVIMVAMP FSFIGAFLAL RLINIDLDIT GMIGLIMLLG LVVKNSILLV DFTNRLRRAG
LDKHAALELA GAIRLRPILM TTLSLVAGAL PVAMGIHLVG TGEGGEFRKG LATVLIGGLT
TSMLLTLLVV PTAYSLMESF TERVSNWFRR RFDPEGWAEE QAALAAERMA PVNGAAAPSA
PYGGTAAALP ITAGEPNGYE PVSAPPARAE G
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