| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4138 |
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| Symbol | |
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| ID | 5541649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5356473 |
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| End bp | 5358347 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896249 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001434187 |
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| Protein GI | 156744058 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0438] Glycosyltransferase
[COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00102626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCAAC CTGCAACCTG CAACCTGCAA CCTTCAACCT TCAGCGACCC GCAGCGCCCT
CCGGTAACAA TTATCATCCT CACGTGGAAC GGGTTAGAGT ACACTCGTCG CTGTATCGAG
AGTATTCGCG CGCATACGAA GGGTATGGCG TATCACCTGT TGGTTGTGGA CAATGGGAGC
AGCGATGGGA CACTGGAGTG GCTGCGCGCG CAGGACGACA TCCGGGTAAT TGCGAATGAT
CGCAACCTGG GATTCACGCG CGGCAACAAT CAGGGCATGG CGGCGACTCC GCCGGATCAC
GATGTGCTAT TGCTCAACAA CGATACGCTG ATCATCCAGG ATTACTGGCT GGCGCACCTC
AGCAATGTGG CGCACAGTCA TCCAGAGTAT GGCATCGTCG GATGCACGCT GTTGCACGCC
AATGGACTGC TCCAGCATGC CGGAACGTAT ATGCCGGCAG ATAGTTTCTG GGGGTATCAG
ATCGGAGGCG GTGAGACGTA CATTGGGCAG TATCCGGGTG TGCGCGAAGT CGAAGGGATC
ACCGGCGCAT GCATGTACAT CCGACGCGAT GTGCGCGCGC GGATCGGCGG CTTCGACGAG
ACGTACACGT CGTACTTTGA GGATACCGAT TACTGTCTGC GAGCGCGCCA GGCGGGGTTC
AAAGTCGTTT GCACCGGCGG TACGCAGGTG ATCCACTACG AGAATACGAG CGCCAGGATC
AACAATGCGT CGTGGCAGGC GATGTGGGAC GAGGGACGCG AGATGTTTAC CCGCAAATGG
CGCACGTTTT ACAACCAGAA ATATCGTCGC GCTGTCGTCT GGCACTCGCT GGTGGCATCG
CCATCCGGGT ACGCCACCTC GTCGCGTGAA CTGGTGATCG AACTCGACCG CTGCGCTATC
GATGTGCGCC TGGCGTGCAT CTGGGGGAAT GATTTCACCG AGCCGCTGAC CGGCGATCCG
CGCATCGATC AGTTGCGCGC CCGTCTTAAG GACTCTCGTC TGCCCCAGGT GGTGTATCAT
CAGGGTGACT CTTTCATCAA GAATAGTGGA CGCTATCGCA TCGGCTATAC GATGCTGGAA
ACCGACCGGT TGCCGGATGA GTGGGTCTAC CAGGCGAACC AGATGGATGA AGTCTGGACG
CCAACGCACT GGGGGGCTGA GGTCTTTTGC GCCAGCGGCG TCCGGCGTCC GATCTCTGTC
GTTCCACTGG GGATCAACCC CGATTATTTT CACCCTGGCA TCACCGGACA TAAACCCGGC
AATCGCTTTG TTTTTCTCTC GATCTTCGAG TGGATCGAAC GCAAAGCGCC GGAACTGCTG
ATCCGCGCCT ATCAGCAAAC GTTTCGCCGC AGCGATGATG TGGTACTGCT GCTCAAAATC
TTCAACCACG ACCCCAGTCT TGATGTCGCC CGACGTATTG GCGACCTGAT CCGCAGCGAT
GGTCCGCCGA TTGTCGTTCT GCCGAATCAG CACGTTGCCG CCTATCAGGT TGGGTGTCTG
TACCGCAGCG CCGATTGTTT CGTGCTGCCG ACGCGCGGTG AGGGCTGGGG CATGCCTGCG
CTGGAGGCAA TGGCATGTGG TCTGCCGGTT ATTTCGACCG CTTGGGGCGG GCAGACGGAG
TTCCTCCATT CAGGTGTCGC CTATCCGCTT CGCATTCGTG GTCTTGTCCC GGCGGAAGCG
CGCGCGCCGT ACTACCGCGG GTTGCGCTGG GCTGACCCCG ATTTCGATCA TCTCTGTGCG
TTGATGCGCC ACGTGTATGA GCATCCCGAC GAAGCGCGCG CAGTCGGGAT GCGCGCTGCT
GCGGAAGCTG CCGCGCGCTG GACGTGGTCG CACGCCGCAG CGAAGATTAT CGAGCGCCTG
GAAGCGATTG AGTGA
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| Protein sequence | MVQPATCNLQ PSTFSDPQRP PVTIIILTWN GLEYTRRCIE SIRAHTKGMA YHLLVVDNGS
SDGTLEWLRA QDDIRVIAND RNLGFTRGNN QGMAATPPDH DVLLLNNDTL IIQDYWLAHL
SNVAHSHPEY GIVGCTLLHA NGLLQHAGTY MPADSFWGYQ IGGGETYIGQ YPGVREVEGI
TGACMYIRRD VRARIGGFDE TYTSYFEDTD YCLRARQAGF KVVCTGGTQV IHYENTSARI
NNASWQAMWD EGREMFTRKW RTFYNQKYRR AVVWHSLVAS PSGYATSSRE LVIELDRCAI
DVRLACIWGN DFTEPLTGDP RIDQLRARLK DSRLPQVVYH QGDSFIKNSG RYRIGYTMLE
TDRLPDEWVY QANQMDEVWT PTHWGAEVFC ASGVRRPISV VPLGINPDYF HPGITGHKPG
NRFVFLSIFE WIERKAPELL IRAYQQTFRR SDDVVLLLKI FNHDPSLDVA RRIGDLIRSD
GPPIVVLPNQ HVAAYQVGCL YRSADCFVLP TRGEGWGMPA LEAMACGLPV ISTAWGGQTE
FLHSGVAYPL RIRGLVPAEA RAPYYRGLRW ADPDFDHLCA LMRHVYEHPD EARAVGMRAA
AEAAARWTWS HAAAKIIERL EAIE
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