Gene Rcas_4132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4132 
Symbol 
ID5541643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5348252 
End bp5349199 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content61% 
IMG OID640896244 
Producthypothetical protein 
Protein accessionYP_001434182 
Protein GI156744053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000656345 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000040546 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTACGAAT ATCTGTACGA CAGCGAGGCA GCCATGGCGA TTGGTCGCAA CAAAATCCGC 
CAGTTCACCG ACGCGATGAC CATTCAGTGG GCGAACGGCA AGAACGAAGC GCGGCTCACT
CCCGGCAGCG GACGGTTCGT CTCGCATGTC GGTTGGTATG CCGAAGTGGG GCGCGACGAC
GAATTTGATC GGTTCATCTC CCAGGCAGGC ATTCCGCAGA TGGAGATCCG GCATCCGCGT
CAGGGCGCAG CGGCGCAGAT CGTCCGGCAC TGGAATCTTG GCGAGCAGAT ACGGTTCTTT
CCGGTCACCA GCGGTCCGGT AGCGACAACC GTGGCTGCCA GTCTGTCGCC GCGCAACATT
GCTGCAACCA TCGAAGCAGG GATCGGTTTG CGTTGGGGGC GCGGCGAGGG CGAACGGTCG
AAGATGGCCA TCCGCGGCTA CTTGCAAATC CGGGGCCCGA AGCGCGCCGA CGCCGGGGCG
CCCGACGAAT GGCTGCTCTA CCCGCGCCTG GTGCAGATTT CAGTACGCTC ACGCATGACC
GATGAACTCC TCGCTGCGCT TGTCGATCAT GTGCGCGTCT GCGAGATCGC CGACACGCTG
GTGGATCGGG CAAAACATCC TGATGTGATT CATTGCTACG AACTGGCGCT GCCGATTGGT
CCGGGTCAGG AAGAACAGTG GGGCAAAGGC GAAACCACGA CGGTCATGCC CATTGCCAGT
CTTCATCCCC AAACGATCGA CCTGTCCTAT CTGCGCAGCC TGTGGCGTCC TGATCAGGTC
GTAGAACTGG CGCTGCGCGA CTGGCCCGAT GTCCAGGCAT GGGCACAGGA ATTCAGTATT
GGCGGGTACG CCGAAACCGC CGGTCAATCG CCGGCACTGG CAGATGATGC GCATACGGGC
AATGAAGCAA TGGCTGCCAA TGGACGCGCG GCGTATGTCG ATGGATAG
 
Protein sequence
MYEYLYDSEA AMAIGRNKIR QFTDAMTIQW ANGKNEARLT PGSGRFVSHV GWYAEVGRDD 
EFDRFISQAG IPQMEIRHPR QGAAAQIVRH WNLGEQIRFF PVTSGPVATT VAASLSPRNI
AATIEAGIGL RWGRGEGERS KMAIRGYLQI RGPKRADAGA PDEWLLYPRL VQISVRSRMT
DELLAALVDH VRVCEIADTL VDRAKHPDVI HCYELALPIG PGQEEQWGKG ETTTVMPIAS
LHPQTIDLSY LRSLWRPDQV VELALRDWPD VQAWAQEFSI GGYAETAGQS PALADDAHTG
NEAMAANGRA AYVDG