Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4126 |
Symbol | |
ID | 5541637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5341313 |
End bp | 5342113 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640896238 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_001434176 |
Protein GI | 156744047 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000167736 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACCAC GAGCATTGAC AATCGCCGGC TCCGACTCCG GCGGCGGAGC AGGCATTCAG GCAGACCTGA AAACCTTCAT GGCGCACGGC GTCTACGGCG CAAGCGCCAT CACCGCCATT ACCGCACAAA ACACCCTGGA AGTACGCGCA GTTGTTCTGC TCGAGCCGAC CATAGTCGTT GCGCAGATCG AAGCCGTGCT CGACGATATT GGCGCCGATG CCGTCAAAAC CGGTATGCTC GGCAATGCCG CCATCATCGA AGCAGTCGCC GATACACTCG CGCGTTACCG CATCGAGCGC CTGGTCATCG ACCCGGTGAT GGTTGCAAAG AGCGGCGCGC GTCTACTGGA GGAAGACGCC ATCACAACCC TGCGTGAGCG CCTGCTGCCG CTGGCTTTAG TCATCACGCC GAACCTGCCG GAAGCCTCGG TGCTGCTGAA CCGCCAGGTG ACCGATGAAC ACGACATGGC GGACGCCGCG CGCGACCTGC ACGCGCTGGG TCCACGGTAC GTCCTGCTCA AGGGAGGGCA CCTGGCAGGA GACGACGTTG TCGATCTGCT GTACGATGGT GAGCGCTTTG TCGAACTGCG CGCGCAGCGC CTTGAGACAA ACCACACCCA TGGTACCGGC TGCACCTACG CCGCTGCCAT CGCCGCCCTG ATCGCGCGTG GCTTGCTGGT CGAACAGGCG GTGCGTCAGG CGCACGCCTA CCTCCACGAG GCTATCGTCC ATGCCCCGGC TATCGGCAAG GGGTACGGAC CGGTCAATCA CCTGGTGCAC GGATTGCCGA CGGACCGGTG A
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Protein sequence | MIPRALTIAG SDSGGGAGIQ ADLKTFMAHG VYGASAITAI TAQNTLEVRA VVLLEPTIVV AQIEAVLDDI GADAVKTGML GNAAIIEAVA DTLARYRIER LVIDPVMVAK SGARLLEEDA ITTLRERLLP LALVITPNLP EASVLLNRQV TDEHDMADAA RDLHALGPRY VLLKGGHLAG DDVVDLLYDG ERFVELRAQR LETNHTHGTG CTYAAAIAAL IARGLLVEQA VRQAHAYLHE AIVHAPAIGK GYGPVNHLVH GLPTDR
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