| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4121 |
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| Symbol | thiE |
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| ID | 5541632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5334717 |
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| End bp | 5335403 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896233 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001434171 |
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| Protein GI | 156744042 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00354479 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATGGT CCACATTAGT CGATCCGTCC CCATCGGTTC TGACCAACCC GATCCCGTTT
CCGTCCGGCA GAGGCATTGT GTATGTTATT ACCGACCGAC GCGCCGCAGG TGAACGTTCA
CTGATCGACA TTGTGCATGC GGCGTTGCGT GGCGGCGCGA ATGCCATTCA ACTGCGCGAC
AAGGATGTGC CCGCACGCGC CATGATCGCC CTGGGCGAGG CGCTGCTGCC GCTGACTCGC
GCGGCTGGCG TTCCCCTGAT CGTCAACGAC CGCGTCGATG TGGCGCTGGC GCTGGACGCC
GATGGTGTTC ACGTCGGTCA GGACGATATT CCGGCGGATA TGGTGCGACG GATCATCGGT
CCAGCACGCA TTCTGGGAGT ATCGGTCGCA ACAGTGGAAC AGGCGCAGCA AGCAGCGCGT
GATGGCGCAA CGTATGTCAG CGTCGGCGAT CTCTTTGGCA CGCCGAGCAA ACCGGATGCC
GGACCGCCGA TCGGTCTCAC GCCGCTGACA GAGATCGCGC GCGCGGTCGA TCTGCCGGTG
CTGGGAATTG GCGGGATAAC TGTCGCAAAT GCAGCATCGG TTGTGCGAGC AGGCGCCGTA
GGAGTGGCAG TGATTTCGGC GGTCATTGGC GCGCCGGACC CGGAAGCGGC GACGCGAGCG
TTGTGCGATG TGGCAGCGCA AAGGTAG
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| Protein sequence | MAWSTLVDPS PSVLTNPIPF PSGRGIVYVI TDRRAAGERS LIDIVHAALR GGANAIQLRD
KDVPARAMIA LGEALLPLTR AAGVPLIVND RVDVALALDA DGVHVGQDDI PADMVRRIIG
PARILGVSVA TVEQAQQAAR DGATYVSVGD LFGTPSKPDA GPPIGLTPLT EIARAVDLPV
LGIGGITVAN AASVVRAGAV GVAVISAVIG APDPEAATRA LCDVAAQR
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