| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4113 |
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| Symbol | glpC |
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| ID | 5541624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5325657 |
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| End bp | 5326907 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896225 |
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| Product | sn-glycerol-3-phosphate dehydrogenase subunit C |
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| Protein accession | YP_001434163 |
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| Protein GI | 156744034 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.774885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0186832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC CAGAGGATCA CATCGAACAA TCGCTTGAAG CGTCGCTCGA CCATTGCATC
AAGTGCAACA TTTGCACGGC GGCGTGTCCG GTCAGTGCCG TTACCGATTT GTTTCCCGGA
CCCAAATATG TCGGTCCGCA GGCGCAGCGT TTCCGGCACG CGCGTCAACC GTCGCCCGAT
GAGTCGGTAG ATTACTGTTC AGGATGTCGC GTGTGCAATG AGGTCTGCCC GACCGGCGTG
CGGATCGCCG AACTGAATGC GCGGGCGCGG GCGCGTCTGG TGGCAGAGCG CGGCATCCCG
CTGCGCAATC GCCTGATCAG TCGCTCTGGT CTGGTCGGTC GTTTGGGGGC GGGACCGCAC
GCGCCGATCG CCAATGCGCT GCTCGGTTCC AAACCGCTGC GCATGGTCAT CGAGCGCACA
CTGGGCATTG CGCGGGAGGC GCCATTGCCG GCGTTCAGCC GGTACACCTT TCGGTCGTGG
TTCCGGCGCC GACGCGCGCC GCAGATCGAC GCCGGAACAC CGAAACGCCA GGTGGTCTAC
TTCCATGGAT GCTCGGCAAA CTACTATGAG CCGTGGATCG GCAAAGCAGT CGTCGCGGTG
CTCGAACACA ACGGTTTCGA GGTGCTGCTT CCTCGCCAGC GCTGCTGCGG TCTGCCGCTG
CTCTCGAATG GCGACTTTGC GGCTGCACGT CGCGCGCACG AAGAGAACGT CGCGTTCCTG
GCGCCGTATG CGCTGCGCAC CATCCCAATT GTTGGCGCCA GCACCAGTTG TACACTGACG
CTCAAAGAAG AAGCGCCGGA ATTGCTCGGC ATGCAGAGCG ATACGGTGCG CGCAGTTGCA
CAGCAGACAT ATGACATCTT TGAGTTTCTG CGTCTGCTCC ACATGCGCGG CGAGTTGCGC
ACCGACTTTC GCCCGATTGA GCGCACGCTG CCGTACCATC CGCCATGCCA GTTGCGCGCG
CATCGCATCG GTCGCCCCGC GCTCGACGTG CTGGAACTCG TCCCCGGACT GCGCCTGATC
GAAACGCACG CCGGTTGCTG CGGCATCGCC GGAACATATG GATTGAAAGT CGAGAAGTAT
CGGATCAGCA TGGATGTCGG GGCGCCATTG TTCGAGACCG TGCGACGCTC CGGCGCCGAT
ATGGCGCTGT GTGATTCAGA GACATGCCGC TGGCAGATCA GCCATGGCGC TGGCGTGGTT
GCGCGCCATC CGATTGAGAT TCTTGCCGAA GCATACGGAC TTGTGACGTG A
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| Protein sequence | MIIPEDHIEQ SLEASLDHCI KCNICTAACP VSAVTDLFPG PKYVGPQAQR FRHARQPSPD
ESVDYCSGCR VCNEVCPTGV RIAELNARAR ARLVAERGIP LRNRLISRSG LVGRLGAGPH
APIANALLGS KPLRMVIERT LGIAREAPLP AFSRYTFRSW FRRRRAPQID AGTPKRQVVY
FHGCSANYYE PWIGKAVVAV LEHNGFEVLL PRQRCCGLPL LSNGDFAAAR RAHEENVAFL
APYALRTIPI VGASTSCTLT LKEEAPELLG MQSDTVRAVA QQTYDIFEFL RLLHMRGELR
TDFRPIERTL PYHPPCQLRA HRIGRPALDV LELVPGLRLI ETHAGCCGIA GTYGLKVEKY
RISMDVGAPL FETVRRSGAD MALCDSETCR WQISHGAGVV ARHPIEILAE AYGLVT
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