| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4111 |
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| Symbol | |
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| ID | 5541622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5322679 |
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| End bp | 5324349 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896223 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001434161 |
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| Protein GI | 156744032 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0402229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCC TTACAACTGA TGTTCTGGTG ATCGGCGGCG GTGCTACCGG CGCCGGCGCG
CTGCGGGACC TTTCACTGCG CGGCATCCGA TCCGCGCTGG TCGAAAAGGG TGATCTGACG
CACGGCACCA CCGGGCGATA CCACGGGTTA CTGCACTCTG GCGGTCGTTA TGTGGTGAAA
GACCCGCAAT CAGCGGAGGA GTGCGCGCGC GAAAATGAAA TCTTGCGCAA GATTATGCCG
CACTGTATCG AGGAAACGGG CGGATTGTTC GTCGTGACTC CGGCAGACGA CGAGTCGTAT
GCCGAACGGT TCATTGCCGC CTGCCGTCGC ACCGGTGTGT GGGTCGAGGA AATACCGGTG
CGTGAGGCGC TACGCCGCGA ACCGCTGCTC AATCCACGCA TTCAGCGGGC GTTTGCCGTG
CGCGATGGCG CCGCCGACTC GTTCCTTGCC ACGCACGCCA ATGCCGATGA TGCGCGACGC
CACGGCGCAC AGGTGATGAC CTACCATCGT GTGACCAGGT TGGAGCGTGT TGGTGATCGG
ATCGTCGGCG CGTTGTGCGA AGATCTGCGA AGCGGCGAAA CGGTGCGCAT CCACGCCGGT
TTCATCATTA ACGCAACCGG TGCATGGGCG GGGAAGATCG CGGCGATGGC CGGGTTGCGC
ATCAACGTTG TGCCCGGCAA GGGAACCATG ATCGCAATGA ACCACCGGAT TGTCAACACG
GTCGTCAACC GCTGCAAGAT GCCGTCCGAC GGCGATATTA TCGTGCCCAT CCATACGGTC
GCAGTGCTTG GCACTACCGA CATCCCTGTG CCTGATCCCG ATGTGTACGA CATCACCCCG
GAAGAGGTCC GGCTCATCCT CGAAGAGGGC GAGTGCCTGA TTCCCGGCGT CAGCCGCATG
CGCGCGCTGC GAGCATGGGC AGGGGTGCGA CCATTGTACA AAGATCAGGA CGCGGGAAAC
GATCGCGATA TTCCTCGCAC CTATAAGTTG CTCGACCACG AAACACGCGA TGGTGTCTCC
GGCATGGTCA GCATTGTCGG CGGTAAGTGG ACGACGTATC GATTGATGGC GGAGCACACT
GTGAACCTGG TCGCGCAACG TCTCGGCGTC ACCACACCAT GCCGGACGGC AGATCTAACG
ATTGAACCGT CGCACGATGG CGCCGCCGCT GCACCGCGCG CTCCGGCACG CTCACAGTTT
GCCATTCTGG CGTCGCCGTT CTATATGCTG GGACACAGGC TGGCAGAGGT CGAGGCGGAC
GATAGCTACG GCGATCTCAT CTGCGAATGT GAACTGGTGA CGCGCGCCCA CCTTGAAGCG
GCGATCCGCA GTGATGGAAC CGCCAATCTC GACGATCTGC GCCGCGATAC GCGCCTGGGG
ATGGGTCCGT GTCAGGGTGG ATTCTGTACC TATCGCGCCG CTGCGATCTG GCACGAACTG
CGCGATGGGG CAACACATAC GGTTGGCGCG CCGCCGGCAA CGGCGTTGCT CCGACATTTC
CTTCAGGAAC GCTGGAAGGG AGTCACGCCG ACGTTGTGGG GGGATCAGTT GCGCCAGGAA
CGCCTCGACG AACTGAACTA TCTCGAAACG CTTGCCGTTG ATCGCTTGCC GGAAGCCACC
CTCGACGCCA TCGAGCAGCC ACGAGATGTT GTGATCGAGG AGGTTGTGTG A
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| Protein sequence | MRTLTTDVLV IGGGATGAGA LRDLSLRGIR SALVEKGDLT HGTTGRYHGL LHSGGRYVVK
DPQSAEECAR ENEILRKIMP HCIEETGGLF VVTPADDESY AERFIAACRR TGVWVEEIPV
REALRREPLL NPRIQRAFAV RDGAADSFLA THANADDARR HGAQVMTYHR VTRLERVGDR
IVGALCEDLR SGETVRIHAG FIINATGAWA GKIAAMAGLR INVVPGKGTM IAMNHRIVNT
VVNRCKMPSD GDIIVPIHTV AVLGTTDIPV PDPDVYDITP EEVRLILEEG ECLIPGVSRM
RALRAWAGVR PLYKDQDAGN DRDIPRTYKL LDHETRDGVS GMVSIVGGKW TTYRLMAEHT
VNLVAQRLGV TTPCRTADLT IEPSHDGAAA APRAPARSQF AILASPFYML GHRLAEVEAD
DSYGDLICEC ELVTRAHLEA AIRSDGTANL DDLRRDTRLG MGPCQGGFCT YRAAAIWHEL
RDGATHTVGA PPATALLRHF LQERWKGVTP TLWGDQLRQE RLDELNYLET LAVDRLPEAT
LDAIEQPRDV VIEEVV
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