| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4088 |
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| Symbol | |
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| ID | 5541599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5299190 |
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| End bp | 5299891 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896200 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001434138 |
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| Protein GI | 156744009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.211402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC CGCTGTTCCC CTTACATACG GTGCTGTTTC CCGGCGCACC GATTTCGCTC
CATATCTTTG AGGAACGGTA CCGCCTGATG ATTGGCCAGT GCCTGGCGCA GCAGCAACCG
TTCGGGGTCG TGCTGCTCCG CTCTGGCAGC GAGGTCAGCC CCGACGACCC CTTCATTCGT
AGTCTGCGTC GTCAGTTGAA TGTGGAGGAG GACGACATCG TGCGTGAGGC GGTCGTTCCC
TTTGAGATCG GCACGATTGC GCGCATCACC GAAAGCCAGC AGTTCGATGA TGGGCGTTAC
CTGCTGATTG CCCAGGGGCA ACGTCGCTTC CGTGTGCAAT ACATCATTCA GCACCAACCG
TATCTCGTCG CCTCGGTGTC GCAACTGGCA GAAGACACGT CAACCCTTTC GGGCGCAGAA
ATCACCAGAC TGCGCCAGAC CTATGAACAG TACTGGCAGA CCATGACGCG TGTCACCGGA
AGAGAGTACG ATTATGAGGA GTTGCCGGTC GATGCCGTTG AACTCTCCTA CTGGCTGGCG
CATCGCTTCC GTGTGGACAA TCAGCGGAAA CAGCGCTGGC TGGAGAGCGA TGTCGCCACG
CGCCTGCGTG AAGTGACCGG GATGCTTAAT GTGGAGATCG CTCTGCTCCC GCGCACTGCT
CGCCGACGCG CTGGCGATGC ATGGCCCTGG TCGTGGAACT AA
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| Protein sequence | MKLPLFPLHT VLFPGAPISL HIFEERYRLM IGQCLAQQQP FGVVLLRSGS EVSPDDPFIR
SLRRQLNVEE DDIVREAVVP FEIGTIARIT ESQQFDDGRY LLIAQGQRRF RVQYIIQHQP
YLVASVSQLA EDTSTLSGAE ITRLRQTYEQ YWQTMTRVTG REYDYEELPV DAVELSYWLA
HRFRVDNQRK QRWLESDVAT RLREVTGMLN VEIALLPRTA RRRAGDAWPW SWN
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